KEGG   Chlorocebus sabaeus (green monkey): 103228872
Entry
103228872         CDS       T04361                                 
Symbol
PNN
Name
(RefSeq) pinin, desmosome associated protein
  KO
K13114  pinin
Organism
csab  Chlorocebus sabaeus (green monkey)
Pathway
csab03013  Nucleocytoplasmic transport
csab03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:csab00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    103228872 (PNN)
   03015 mRNA surveillance pathway
    103228872 (PNN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csab03019]
    103228872 (PNN)
   03041 Spliceosome [BR:csab03041]
    103228872 (PNN)
Messenger RNA biogenesis [BR:csab03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     103228872 (PNN)
Spliceosome [BR:csab03041]
 Complex C
  Other components
   EJC/TREX
    103228872 (PNN)
SSDB
Motif
Pfam: Pinin_SDK_N Pinin_SDK_memA
Other DBs
NCBI-GeneID: 103228872
NCBI-ProteinID: XP_007984743
Ensembl: ENSCSAG00000015399
UniProt: A0A0D9RS87
Position
24:15949015..15956969
AA seq 721 aa
MAVAVRTLQEQLEKAKESLKNVDENIRKLTGRDPNDVRPIQARLLALSGPGGGRGRGSLL
LRRGFSDSGGGPPAKQRDLEGAVSRLGGERRTRRESRQESDPEDDDVKKPALQSSVVATS
KERTRRDLIQDQNMDEKGKQRNRRIFGLLMGTLQKFKQESTVATERQKRRQEIEQKLEVQ
AEEERKQVENERRELFEERRAKQTELRLLEQKVELAQLQEEWNEHNAKIIKYIRTKTKPH
LFYIPGRMCPATQKLIEESQRKMNALFEGRRIEFAEQINKMEARPRRQSMKEKEHQVVRN
EEQKAEQEEGKVAQREEELEETGNQHNDVEIEEAGEEEEKEIAIVHSDAEKEQEEEEQKQ
EMEVKMEEETEVRESEKQQDSQPEEVMDVLEMVENVKHVIADQEVMETNRVESVEPSENE
ASKELEPEMEFEVEPDKECKSLSPGKEAVSALDMEKESEEKEEKESEPQPEPVAQPQPQP
QPQPQPQPQLQSQSQPVLQSQPPSQPENLSLAVLQPTPQVTQEQGHLLPERKEFPVESVK
LTEVPVEPVLTVHPESKSKTKTRSRSRGRARNKTSKSRSRSSSSSSSSSSSTSSSSGSSS
SSGSSSSRSSSSSSSSTSGSSSRDSSSSTSSSSESRSRSRGRGHNRDRKHRRSVDRKRRD
TSGLERSHKSSKGGSSRDTKGSKDKNSRSDRKRSISESSRSGKRSSRSERDRKSDRKDKR
R
NT seq 2166 nt   +upstreamnt  +downstreamnt
atggcggtcgcagtgagaactttgcaggaacagctagaaaaggccaaagagagccttaag
aacgtggatgagaatattcgcaagctcaccgggcgggatccgaatgacgtgaggcccatc
caagccagattgctggccctttctggtcctggtggaggtagaggacgtggtagtttatta
ctgaggcgtggattctcagatagtggaggaggacccccagccaaacagagagaccttgaa
ggggcagtcagtaggctgggcggggagcgtcggaccagaagagaatcacgccaggaaagc
gacccagaggatgatgatgttaaaaagccagcattgcagtcttcagttgtagctacctcc
aaagagcgcacacgtagagaccttatccaggatcaaaatatggatgaaaagggaaagcaa
aggaaccggcgaatatttggcttgttgatgggtacccttcaaaaatttaaacaagaatcc
actgttgctactgaaaggcaaaagcggcgccaggaaattgaacaaaaacttgaggttcag
gcagaagaagaaagaaagcaggttgaaaatgaaaggagagaactgtttgaagagaggcgt
gctaaacagacagaactgcggcttttggaacagaaagttgagcttgcgcagctgcaagaa
gaatggaatgaacataatgccaaaataattaaatatataagaactaagacaaagccccat
ttgttttatattcctggaagaatgtgtccagctacccaaaaattaatagaagagtcacag
agaaaaatgaatgctttatttgaaggtagacgcatcgaatttgcagaacaaataaataaa
atggaggctaggcctagaagacaatcaatgaaggaaaaagagcatcaggtggtgcgtaat
gaagaacagaaggcggaacaagaagagggtaaggtggctcagcgagaggaagagttggag
gagacaggtaatcagcacaatgatgtagaaatagaggaagcaggagaggaagaggaaaag
gaaatagcgattgttcatagtgatgcagagaaagaacaggaggaggaagaacaaaaacag
gaaatggaggttaagatggaggaggaaactgaggtaagggaaagtgagaagcagcaggat
agtcagcctgaagaagttatggatgtgctagagatggttgagaatgtcaaacatgtaatt
gctgaccaggaggtaatggaaactaatcgagttgaaagtgtagagccttcagaaaatgaa
gctagcaaagaattggaaccagagatggaatttgaagttgagccagataaagaatgtaaa
tccctttctcctgggaaagaggctgtcagtgctttagacatggaaaaggagtctgaggaa
aaagaagaaaaagaatctgagccccaacctgagcctgtggctcagcctcagcctcagccc
cagccccagccccagccccagcctcagcttcaatctcagtcccaaccagtactccagtcc
cagcctccctctcagcctgagaatttgtcattagctgttttgcagccaacaccccaagtt
actcaggagcaagggcatttactgcctgagaggaaggagtttcctgtagagtctgtaaaa
ctcactgaggtaccagtagagccagtcttgacagtacatccagagagcaagagcaaaacc
aaaactaggagcagaagtagaggtcgagctagaaataaaacaagcaagagtagaagtcga
agcagtagcagtagtagttctagtagcagttcaaccagtagcagcagtggaagtagttct
agcagtggaagtagtagcagtcgtagtagttccagtagcagctccagtacaagtggcagc
agcagcagagatagtagcagcagcactagtagtagtagtgagagtagaagtcggagtagg
ggccggggacataatagagatagaaagcacagaaggagcgtggatcggaagagaagggat
acttcaggattagaaagaagtcacaaatcttcaaaaggtggtagtagtagagatacaaaa
ggatcaaaggataagaattcccggtccgacagaaagaggtctatatcagagagtagtcga
tcaggcaaaagatcttcaagaagtgaaagagaccgaaaatcagacaggaaagacaaaagg
cgttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (16)   

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