KEGG   Camelina sativa (false flax): 104703423
Entry
104703423         CDS       T05044                                 
Name
(RefSeq) uncharacterized protein LOC104703423 isoform X1
  KO
K11864  BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
Organism
csat  Camelina sativa (false flax)
Pathway
csat03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:csat00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    104703423
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:csat01002]
    104703423
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:csat04121]
    104703423
   03036 Chromosome and associated proteins [BR:csat03036]
    104703423
   03400 DNA repair and recombination proteins [BR:csat03400]
    104703423
Peptidases and inhibitors [BR:csat01002]
 Metallo peptidases
  Family M67
   104703423
Ubiquitin system [BR:csat04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   BRCC complex
    104703423
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   JAMM
    104703423
   BRISC complex
    104703423
Chromosome and associated proteins [BR:csat03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    BRISC complex
     104703423
DNA repair and recombination proteins [BR:csat03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    BRCA1-A complex
     104703423
SSDB
Motif
Pfam: BRCC36_C JAB Prok-JAB DUF5795
Other DBs
NCBI-GeneID: 104703423
NCBI-ProteinID: XP_010417736
Position
7:30195839..30198618
AA seq 407 aa
MSLTCVNMSEDVWLTCLTHALSTETEEIMGLLLGDIEYSKNGSATALIWGASPQSRSDRQ
KDRVETNPEQLAAASSQADRMTISTGRTTRVIGWYHSHPHITVLPSHVDVRTQAMYQLLD
SGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKPNTTPKSMSLVLANKDSVINLESSLSSS
DSIFPRSSSGQGDIPEQDTSDTATTSGSKGGRRVSDFGAFFVNNGAEANITRRDGTSGNL
SSSAIEIDPMDMSESMQEAMLRSNLETSGVGNVRKEVPLHVLPTSSLLQLNSPLASFKDL
QRVLYEEERAAYHQSVQQSIRDGRVHPLAFIHNTSTYQASMCKLIEYCLSPAISALQGRL
RENKIRLAMLMEEAEVLEAQKLKEAETSGGPSHHLGHGSGSRSRRGS
NT seq 1224 nt   +upstreamnt  +downstreamnt
atgtctctgacatgcgtaaatatgtcggaggatgtctggttgacttgcctcactcacgca
ttatccaccgagaccgaagaaatcatgggtctccttctcggcgacatcgagtactccaaa
aacggaagtgccacagctctgatctggggagcatctcctcagtcacggtctgatcggcag
aaagatcgagtcgaaaccaatcctgaacagttggctgctgcttcatctcaggctgataga
atgaccatatcaacaggcagaactactcgggtgattggatggtaccactcccatcctcat
attaccgtccttccttcccatgtcgatgttcggacacaagctatgtatcagcttttagat
tctgggtttattggcctcatattttcctgttttagtgaagatgctaacaaggttggtaga
atccaagttatcgctttccaatcctctgatggaaagcctaatactactcctaaatcaatg
agcctggtacttgctaataaagattctgtcatcaatttagaatcgtcattaagttcttca
gactctatatttccgagatcctcttctggtcagggagacattcctgagcaagacacaagt
gatacagctacaacttccggatccaagggtggaagaagagtttcagattttggggctttc
tttgttaacaatggtgctgaggccaacatcaccagaagagatggaacaagtggaaatctc
agcagctcagctatagaaattgacccaatggacatgtctgaaagtatgcaagaggcaatg
ctccgttctaatttagaaaccagtggtgtgggaaatgttagaaaagaagtcccacttcat
gttttgccgacttcatcgcttcttcaactaaattcacctctagcttcttttaaggatctg
caaagagtactctacgaggaggaacgagctgcataccaccaatccgtgcagcaaagcata
agagacgggagagttcatcctcttgctttcatccacaacacatcgacatatcaggcttcc
atgtgcaaactgatcgaatactgtttgagtcccgccatcagtgcacttcaaggtaggctg
agggagaacaagatccggttagcaatgctgatggaggaagctgaggttctggaagcacag
aaactaaaagaagcagagacgagcgggggaccatctcatcatctgggtcatggttctggc
agccgaagcagaagaggatcgtag

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (4)   
   Pfam (4)   
All databases (23)   

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