KEGG   Camelina sativa (false flax): 104707050
Entry
104707050         CDS       T05044                                 
Name
(RefSeq) serine--tRNA ligase, cytoplasmic
  KO
K01875  seryl-tRNA synthetase [EC:6.1.1.11]
Organism
csat  Camelina sativa (false flax)
Pathway
csat00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:csat00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    104707050
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:csat01007]
    104707050
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:csat03016]
    104707050
Enzymes [BR:csat01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.11  serine---tRNA ligase
     104707050
Amino acid related enzymes [BR:csat01007]
 Aminoacyl-tRNA synthetase
  Class II (C/G)
   104707050
Transfer RNA biogenesis [BR:csat03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    104707050
 Prokaryotic type
    104707050
SSDB
Motif
Pfam: tRNA-synt_2b Seryl_tRNA_N Occludin_ELL Csm1_N GDPD HDA2-3
Other DBs
NCBI-GeneID: 104707050
NCBI-ProteinID: XP_010421606
Position
8:complement(12436004..12438428)
AA seq 451 aa
MLDINLFREEKGNNPEIIRESQRRRFANVEVVDEIIKLDKEWRQRQFEVESFRKEFNKLN
KQVAQLKIKKEDATEIIQQTEKNKQDSTAKEVEVREAYAALKAKLETVGNLIHDSVPIDK
DEANNAVIKVWGEKLVPTPGLKLKNHVDLVELLGIADTKRGAEIAGARGFFLKGDGLMLN
QALINFGLTFLKKRGFTGLQPPFFMRKDVMAKCAQLAQFDEELYKVTGEGDDKYLIATAE
QPLCAYHLDEWIHPTELPLRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKIEQFCITGPN
DNASWEMLDEMMKNSEDFYQALKLPYRIVSIVSGALNDAAAKKYDLEAWFPSSETYRELV
SCSNCTDYQARRLEIRYGQKKGNEQTKQYVHMLNSTLTATERTICCILENYQREGGVDIP
EVLQPFMGGETFLPFKAKPVVADTKGKKSKA
NT seq 1356 nt   +upstreamnt  +downstreamnt
atgttggatatcaatcttttccgggaagaaaaaggtaacaatccggagatcatccgagaa
tcgcaacgccggagatttgccaatgttgaagttgttgatgagattattaagctcgacaaa
gaatggcgtcaacgtcaatttgaagttgagagcttccgaaaagagttcaacaagctgaac
aagcaagtcgcgcagctcaaaattaaaaaagaagatgcgactgagattattcagcaaacg
gagaaaaacaaacaagattctaccgcaaaggaggtggaagttcgtgaagcttatgctgct
ttgaaagccaaattggagacggttggaaacctgatccatgactcggttccaattgataag
gatgaggctaataatgcagtgattaaagtgtggggtgaaaagctggttcctacgcctggt
ctgaagctgaaaaaccatgtggatcttgttgagcttctcggtattgcagataccaaaaga
ggtgctgaaattgctggagctagaggctttttcctaaagggagatggcttgatgcttaac
caagctcttatcaactttgggctaactttcttgaaaaagagaggattcacaggcttgcag
cctccttttttcatgaggaaggatgttatggccaagtgcgcacaattggcgcagttcgat
gaagagctttacaaggtgactggtgaaggagatgacaaataccttattgcaaccgctgag
cagcctctttgtgcataccatcttgatgaatggatccatccgactgagcttcccctaaga
tatgctggttactcgtcctgctttagaaaagaagctggttcgcatggaagagacactctt
ggtattttccgtgttcaccagtttgagaaaattgaacagttctgcatcactggtcctaac
gacaatgcctcatgggaaatgctggatgagatgatgaagaactctgaagacttttaccaa
gcgctaaagcttccataccgaattgtgtcgatcgtctctggagcattaaacgatgcagct
gccaaaaagtacgacttggaagcttggtttccttcgtcggagacttacagagagcttgtg
tcctgttccaattgtacagactaccaggcccgaaggcttgagatcagatacggtcagaaa
aagggcaatgagcagacgaagcagtatgtgcatatgctgaattcgacacttactgcaaca
gagaggaccatttgctgcattctcgagaactaccagcgagagggtggtgtggatatccct
gaggttctacagccgtttatgggaggagaaacgtttttgcctttcaaagctaagcccgta
gttgctgataccaaagggaagaaatcgaaagcttga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (6)   
   Pfam (6)   
All databases (31)   

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