KEGG   Camelina sativa (false flax): 104727021
Entry
104727021         CDS       T05044                                 
Name
(RefSeq) LOW QUALITY PROTEIN: DNA topoisomerase 3-alpha-like
  KO
K03165  DNA topoisomerase III [EC:5.6.2.1]
Organism
csat  Camelina sativa (false flax)
Pathway
csat03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:csat00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    104727021
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:csat03032]
    104727021
   03400 DNA repair and recombination proteins [BR:csat03400]
    104727021
Enzymes [BR:csat01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     104727021
DNA replication proteins [BR:csat03032]
 Eukaryotic type
  DNA Topoisomerases
   104727021
DNA repair and recombination proteins [BR:csat03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Bloom's syndrome complex (BTR)
     104727021
   FA (Fanconi anemia) pathway
     104727021
SSDB
Motif
Pfam: Topoisom_bac Toprim zf-GRF zf-C4_Topoisom zf-CCHC zf-CCHC_3
Other DBs
NCBI-GeneID: 104727021
NCBI-ProteinID: XP_010444313
Position
11:47714971..47721758
AA seq 920 aa
MSRRGGGPVTVLNVAEKPSVAKSVAGILSNGSFRTREGRSRYNKIFEFDYAINGQPCRML
MTSVIGHLMELEFSDRYRKWHSCDPADLYQAPVMKHVPEDKKDIKKTLEEEARNSDWLVL
WLDCDREGENIAFEVVDVCRAVKHNLFIRRAHFSALIAREIHEAVQNLRDPNQLFAEAVD
ARQEIDLRIGASFTRFQTMLLRDRFAIDSTGEERSRVISYGPCQFPTLGFIVERYWEIQA
HEPEEFWTINCSHQXEEGIATFNWMRGHLFDYASAVILYEMCVEEPTATVMNVPHPRERF
KYPPYPLNTIELEKRASRYFRLSSEHTMKVAEELYQAGFISYPRTETDSFSSRTDLRAMV
EEQTRHPAWGSYAQRLLEPEGGLWRNPGNGGHDDKAHPPIHPTKFSSGESNWSRDHLNVY
ELVVRHYLACVSQPAVAAETTVEIDISGERFSAYGRAILAKNYLEVYRFESWGGSVIPVY
EKGQQFIPTTLTLDSAVTRPPPLLCEADLLSCMDKAGIGTDATMHDHIKKLLDRGYATKD
ANTRFSPTHLGEALVMGYDDMGYELWKPNLRAVMEHDMNEVSVGRKTKAEVLETCLQQMK
ACFLDARVKKSKLLEAMTIFFERSNNTDEGENQTAGEVVRRCNLCNESDMALRKNRDGNF
MVGCMNYPQCRNAVWLPGPTLEASVTTNACQSCGPGPVYKILFKFRQIGIPPGFDVNHLG
CVGGCDDILKQLIDICGTGSRSQARRAPDTVPPNNIRGSNTRQSNVCVHCQQRGHASANC
PSRASASRNSRPTGTNPINDESTVSCNTCGAPCVLRTASTEANRGRKFFSCQTQGCSFFA
WEDSISNSGGNATTWSNSGGSGRRGSRGRGRGGRGGQSGGGRRGSGTSFVSATGEPVSAI
RCFSCGDPSHFANACPNRNS
NT seq 2763 nt   +upstreamnt  +downstreamnt
atgtcgcgacgaggcggcggccccgtgacggtgttgaacgtcgcggagaagccgtctgtg
gcgaagtcagtggcggggattctgtccaatggaagtttccggactcgagagggtaggtct
cgctacaacaaaatcttcgagttcgattacgccattaatggccagccatgtcgtatgcta
atgacttccgtcatcggtcacctgatggagcttgagttttccgatcgctaccgcaaatgg
cactcctgcgacccggcagatctgtaccaagctccggtcatgaaacacgttcccgaggac
aaaaaggatattaagaagacattggaggaggaagcaaggaacagtgactggcttgtgctg
tggcttgattgtgatagggaaggtgaaaacattgcttttgaagttgttgatgtttgcaga
gctgtcaaacataatctttttatacggagggcgcatttctctgcgttaattgccagggaa
attcacgaagcagttcaaaatcttagagatcctaatcaactgtttgctgaggctgtagat
gctagacaagaaatagacctacgcattggtgcttctttcactagatttcagactatgttg
ctgagagataggtttgctattgactccacgggtgaggagaggagtcgtgttataagttat
ggtccttgtcagtttcctacacttggctttattgtagagcgatactgggagatccaggca
catgaaccagaagagttttggacaatcaactgttctcaccaatgagaagaaggcattgcc
acctttaattggatgcgtggtcatctcttcgattatgcttcagctgtcatattatatgag
atgtgtgttgaagaacctactgccaccgtaatgaatgtcccacatccaagggaacgattc
aaatatcctccttatcctttgaacaccattgaacttgaaaaacgtgcttcaagatacttc
cgcctgagttcagagcacactatgaaggtggcagaagaattatatcaggctggtttcatc
agctatcctcgtacagagactgattctttttcgagcaggacagatctacgtgctatggtg
gaggaacaaacaagacatcctgcgtggggttcatatgcacaaagactactggaacctgag
ggggggctctggagaaaccctggtaatggtggtcatgatgacaaggctcacccacccatt
cacccaacaaagttttctagcggagagtctaactggagcagagatcaccttaatgtatat
gagctagttgttcgccattacctagcatgtgtttcccagccagcagttgctgctgaaact
accgtcgaaattgatatttctggtgagcgcttttctgcatatgggagagcaatattagct
aaaaattacctggaggtgtaccgctttgagtcatggggaggttcagtgattcccgtgtat
gaaaaagggcagcagtttatcccaacaactttgactcttgattcagctgtaacaaggcca
ccaccgctattgtgtgaagctgacttactgagttgtatggacaaggcaggcattggcacc
gatgcgacaatgcacgaccacataaagaaacttcttgatcggggttatgctacaaaagat
gctaatacacggttttctccaacccacctgggtgaggcgcttgtgatgggatatgatgac
atggggtatgaactttggaaaccaaatctcagagctgtcatggaacatgatatgaatgaa
gttagtgttgggaggaagactaaagctgaagttcttgaaacatgtttgcagcaaatgaaa
gcttgtttcttagatgcaagagtaaaaaaatcaaagctcctagaagcaatgacaattttc
tttgaaagatctaataacactgatgaaggtgaaaatcagacagctggtgaagttgtccga
cgatgcaatctctgcaatgaatcagatatggcactcaggaagaaccgggatggcaatttc
atggttggatgcatgaattatcctcagtgtcgaaatgcagtctggcttcctggaccgaca
ctggaagcatctgtcactactaatgcttgtcaatcctgtggtccaggcccagtctacaag
atacttttcaagttccgtcaaattggaattccaccaggctttgatgttaatcacttgggt
tgtgtcggtggctgtgatgacattcttaaacagttgatagacatatgtggaactggatcc
cgttctcaagcaaggagagctccagatactgtacctccaaacaatatccgaggaagcaat
acaagacagagtaatgtctgcgtacattgtcagcaacgaggacatgcttctgctaattgt
ccctcacgggcttcagcatctcgaaattctcgtcctactggaacaaatccgataaatgat
gagagtacagtatcatgtaacacttgtggagcaccatgtgttcttcgtacagccagcaca
gaagctaacaggggaagaaaattcttctcatgtcagacacagggctgcagtttctttgca
tgggaagatagcatcagcaacagtggtgggaatgcaacaacatggtctaatagcggtgga
agcggtagacgtggcagccgtggtcgtggccgtggaggtagaggtggccaaagtggtgga
ggacgacgcggcagtggaacaagcttcgtctctgcaactggagagccagttagtgctata
aggtgcttctcatgtggggatccttcacattttgctaacgcttgtcctaatcgtaactca
taa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (19)   

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