KEGG   Camelina sativa (false flax): 104731928
Entry
104731928         CDS       T05044                                 
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 28
  KO
K13181  ATP-dependent RNA helicase DDX27 [EC:5.6.2.7]
Organism
csat  Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:csat00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:csat03041]
    104731928
   03009 Ribosome biogenesis [BR:csat03009]
    104731928
Enzymes [BR:csat01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     104731928
Spliceosome [BR:csat03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA helicase-like proteins
    104731928
Ribosome biogenesis [BR:csat03009]
 Eukaryotic type
  Pre-60S particles
   Helicases
    104731928
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_22 ARTD15_N
Other DBs
NCBI-GeneID: 104731928
NCBI-ProteinID: XP_010449739
Position
12:16379218..16383803
AA seq 788 aa
MPSSFFFDAASDDELELLRNEENSSGEEDVEEDEAEERIAGEDEDGEEEDEDEDDEEEVE
KRKRDADAQSPWDFASYSSSVGEEHARRHTTSIDEKISKAIQHRPVPISIDEDEEEEEED
EDVSGAEADKQEEYISEDDEAAEYKPEDVVPKPFFSTVDGVSFHADTFMELNLSRPLLRA
CETLGYKKPTPIQAACIPLALTGRDLCASAITGSGKTAAFALPTLERLLFRPKRVFATRV
LILTPTRELAVQIHSMIQKLAQFTDIKCGLIVGGLSVREQEVVLRSMPDIVVATPGRMID
HLRNSMSVDLDDLAVLILDEADRLLQTGFATEITELVRLCPKRRQTMLFSATMTEEVKEL
VKLSLNKPLRLSADPSARRPPGLTEEVVRIRRTREANQEAVLLSLCTRTFKSKVIIFSGT
KQAAHRLKILFGLAGLKAAELHGNLTQAQRLDSLELFRKQEVDFLIATDVAARGLDIIGV
QTVINYACPREIDSYVHRVGRTARAGREGYAVTFVTDSDRSLLKVIAKKVGSKLKSRVIP
EQSIVKWSQIIDEMEDQYSAVISAERDERALRKAEMEFAKAENMLEHRDEIYSRPKRTWF
MTEKEKKLVAQAEKDSAGNPSGSELVSANIAEDLKMKEKRKREREKNLPRKKRRKLEAAR
EMLEDDEEEEEDEEEEGEEKRGRSRGKDKKKQDTEKKGLTLVDIGYRRAKAVKAKQRAID
SGKMDRPTPNKKQVRSKPKSQPRDEEMKDLFKSDMSENKQGRGGGAGGAKHRTQSKNSFK
SKARYKRR
NT seq 2367 nt   +upstreamnt  +downstreamnt
atgccgtcgagtttcttcttcgatgctgctagcgacgacgagctcgaattactacgcaat
gaagaaaatagtagtggtgaagaagacgtagaggaagacgaagcagaagagcgtatagct
ggagaagacgaagatggagaagaggaggatgaagatgaagatgacgaagaagaagttgaa
aagaggaaacgagatgctgatgctcagtctccttgggatttcgcatcttattcaagctcc
gttggtgaagaacacgctcgccgtcacacaacgtctattgatgaaaagatctccaaagct
atccagcatcgtccagttcccatttcaatagatgaagacgaagaagaagaagaagaagac
gaagatgtctccggtgctgaagctgataaacaagaggagtatatttcggaagacgatgag
gcagctgagtacaaaccagaagatgttgttcccaagccattcttctctacagtggatgga
gtttcatttcatgctgatactttcatggagcttaatctctctcgtccgttgcttcgagct
tgtgaaactcttggttacaagaaacctactcctattcaggcagcttgtatacctttagca
cttacagggcgtgatctttgtgctagtgccatcactggatcaggaaagactgctgcattc
gctttacctactcttgagaggttactgttccgtcccaagcgtgtctttgctactagagtt
cttattctcactccaacaagggagttggctgtccagattcatagcatgattcagaagctt
gcacagtttactgatattaaatgtgggttgattgtaggagggctttctgtaagggagcaa
gaggtggttctgaggtctatgccagatattgttgtggcaactcctggacgtatgatagat
catttgcgtaattccatgtctgttgatttggatgatctagcggtcttaatccttgatgag
gctgaccgccttctacagactgggtttgccactgaaattaccgagctggttcgtttatgt
cccaagagaaggcaaacaatgctcttctcagccacaatgactgaagaagttaaagagcta
gtcaaactttccttgaacaaaccgttgcgtctctcagctgatccatcagctagaaggcca
ccaggcctgactgaggaggtggtaagaatacgtaggactcgtgaggcaaatcaggaagct
gttcttctgtcattgtgcacaagaacttttaaatcaaaagtcattatctttagtggaaca
aaacaagctgcccatagactgaaaattttgttcgggttagctggcctcaaagcagctgag
cttcatggaaacctaacccaagcacaacgtcttgattctctggaacttttcagaaagcaa
gaggttgattttctcattgctactgatgtagccgctcgaggacttgacatcattggtgtt
caaacagttataaattatgcttgcccgcgggaaatagacagttatgttcacagagttggt
agaacagctagggctggaagggaaggttatgctgtaacgtttgtgactgatagtgatcga
tcccttttgaaagttattgcaaaaaaggtgggatcaaagttgaagagccgagtcatccca
gagcagtcaatcgtcaagtggtctcagataatcgatgaaatggaagatcagtattccgct
gttatttcagcagaaagggatgagcgagctctaaggaaagctgaaatggaatttgcaaag
gcggagaacatgctagagcacagagatgaaatatattcacgcccaaaaaggacttggttc
atgacagagaaggagaagaagctcgtggcacaggctgaaaaggattctgcagggaaccct
tctggaagcgaactagttagtgctaatatagcagaggacctcaagatgaaggagaagaga
aaacgtgaacgcgagaagaatctcccaaggaaaaaacgtagaaagctagaagctgccaga
gagatgctagaagatgacgaagaagaagaggaagacgaagaagaagaaggagaggaaaag
cgaggaaggtcaagagggaaagacaagaagaaacaagatacagagaagaagggattgact
ctagtggatattggttaccggcgagcaaaagcggtgaaagcaaaacagagagcaattgat
tccggtaagatggatagaccaacgccgaacaagaaacaagtacgaagtaaaccaaaaagc
cagcctcgagatgaagagatgaaagatctgttcaagagtgatatgagcgagaataaacag
ggaagaggcggcggcgctggtggagcaaaacatcggacgcagtcaaagaactcgttcaag
agcaaagctcgatataaacgtaggtaa

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (5)   
   Pfam (5)   
All databases (19)   

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