KEGG   Camelina sativa (false flax): 104739376
Entry
104739376         CDS       T05044                                 
Name
(RefSeq) elongation factor 1-alpha 1
  KO
K03231  elongation factor 1-alpha
Organism
csat  Camelina sativa (false flax)
Pathway
csat03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:csat00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    104739376
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csat03019]
    104739376
   03016 Transfer RNA biogenesis [BR:csat03016]
    104739376
   03012 Translation factors [BR:csat03012]
    104739376
   04131 Membrane trafficking [BR:csat04131]
    104739376
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:csat04147]
    104739376
Messenger RNA biogenesis [BR:csat03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Trans-acting binding proteins
     104739376
Transfer RNA biogenesis [BR:csat03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    104739376
Translation factors [BR:csat03012]
 Eukaryotic type
  Elongation factors
   104739376
Membrane trafficking [BR:csat04131]
 Autophagy
  Chaperone mediated autophagy (CMA)
   Other CMA associated proteins
    104739376
Exosome [BR:csat04147]
 Exosomal proteins
  Proteins found in most exosomes
   104739376
SSDB
Motif
Pfam: GTP_EFTU GTP_EFTU_D3 GTP_EFTU_D2 MMR_HSR1 GTP_EFTU_D4 AAA_22 SRPRB
Other DBs
NCBI-GeneID: 104739376
NCBI-ProteinID: XP_010458006
Position
14:3326761..3329164
AA seq 449 aa
MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL
DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT
GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKK
VGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQD
VYKIGGIGTVPVGRVETGLIKPGMVVTFAPTGLTTEVKSVEMHHESLLEALPGDNVGFNV
KNVAVKDLKRGYVASNSKDDPAKGAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF
SEILTKIDRRSGKEIEKEPKFLKNGDAGMVKMTPTKPMVVETFSEYPPLGRFAVRDMRQT
VAVGVIKSVDKKDPTGAKVTKAAVKKGAK
NT seq 1350 nt   +upstreamnt  +downstreamnt
atgggtaaagagaagtttcacatcaacattgtggtcattggccacgtcgattctggtaaa
tccaccactactggtcacttgatctacaagttgggtggtattgacaagcgtgtcattgag
aggttcgagaaggaggctgctgagatgaacaagcgttccttcaagtacgcatgggtcttg
gacaaacttaaggccgagagggagcgtggtatcaccattgacattgccctttggaagttt
gagaccaccaagtactactgcacagtcattgatgctcctggtcatcgtgatttcatcaag
aacatgattaccggtacctcccaggctgattgtgctgtccttatcattgactccaccact
ggaggttttgaggctggtatctccaaggatggtcagacccgtgagcacgctctccttgct
ttcacccttggtgtcaagcagatgatctgctgttgtaacaagatggatgccacaaccccc
aagtactccaaggctaggtacgatgaaatcatcaaggaggtgtcttcctacttgaagaag
gttgggtacaaccctgacaaaatcccgtttgtgcccatctctggattcgagggtgacaac
atgattgagaggtccaccaaccttgactggtacaagggaccaactctccttgaggctctt
gaccagatcaacgagcccaagaggccatctgacaagccccttcgtctcccacttcaggat
gtctacaagattggtggtattggaacggtgccagttggacgtgttgagactggtttgatc
aagcccggtatggttgtgacctttgcccccacagggttgaccactgaggtcaagtctgtt
gagatgcaccacgagtctcttcttgaggcgcttcccggtgacaatgttgggttcaatgtt
aagaatgttgctgtgaaggatcttaagagagggtatgtcgcctccaactccaaggatgac
cctgccaagggagctgccaacttcacctcccaggttatcatcatgaaccaccctggtcag
attggaaacggttacgccccagtcctcgattgccacacctctcacattgcagtcaagttc
tctgagatcttgaccaagattgacaggcgttctggtaaggagattgagaaggagcccaag
tttttgaagaatggtgatgccggtatggtgaagatgactcctaccaagcccatggttgtt
gagactttctctgagtacccaccattgggacgttttgctgtgagggacatgaggcagact
gttgcagtcggtgtcatcaagagtgttgacaagaaggacccaactggagccaaggttacc
aaggctgcagtcaagaagggtgcgaaatga

  All links  
Ontology (6)   
   KEGG BRITE (6)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (21)   

Download RDF
DBGET integrated database retrieval system