KEGG   Camelina sativa (false flax): 104739453
Entry
104739453         CDS       T05044                                 
Name
(RefSeq) protein CHROMATIN REMODELING 20 isoform X1
  KO
K10779  transcriptional regulator ATRX
Organism
csat  Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:csat00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:csat03000]
    104739453
   03036 Chromosome and associated proteins [BR:csat03036]
    104739453
Transcription factors [BR:csat03000]
 Eukaryotic type
  Zinc finger
   Cys4 GATA-factors
    104739453
Chromosome and associated proteins [BR:csat03036]
 Eukaryotic type
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    104739453
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C ResIII ADD_ATRX
Other DBs
NCBI-GeneID: 104739453
NCBI-ProteinID: XP_010458103
Position
14:3693116..3704494
AA seq 1469 aa
MEPNEGKGKDQGEKPEEKVYTVEATEDVMDITDEIMEVDQEMMEAKLEEVMKARDERGEH
IDVQMEENNNQDGQKDEDMQATESISESSEFSSEEDEQLLLGRDDDLDHEKPLSEEEIEE
LISDFLGVESKAADAQEALEKESLSNVESEVRKELSQTLSGEELNKAVAAEMMTFKDEWE
ATLDELETESANLLEQLDGAGIELPKLYEMIESQAPNGCHTEAWKQRAHWVGTQVTKETV
ESLANAERFLHTHRPVRKRHGKLLEEGASGFLEKKLADGAAKESLAGTSELDWSSLNKVF
SEKRDESISFGSKDWASVYLASTPQQAAAMGLEFPGVNEVEEIEEIDAGLADPFLADAIE
NERELPLSEEQKKNYIRVKEEDDLNSDRELQLRLKRKRRSKRSKQVIRCTAENMDDDCVY
LNGNYIAQSSGEDRVKIPETSTQVHNNEVNRVENGKLSNSDVDTMRDDSHNPANSFRCTA
CNNVAVEVHTHPLLEVIVCMDCKRSIEDRVAKIEDSSERSCEWCGHITDLIDCRTCEKLF
CASCIKRNIGEEYLSEAQSSGWDCCCCSPMPLQRLTLELEKAIRDKKSVELSSDSSSDSS
SDSSSDNNSADVNVAISLKKKSKKRIRRIIDDAELGKDTRRKIAIEKERQERLRSLQFSA
RYKTISSMGDLKSIPEGAEVEVLGDAHSGYIVNVAREIGEGAVRVPCSISAKLKVHQVTG
IRFMWENIIQSISRVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRCVDLGLKTALIVT
PVNVLHNWRSEFMKWMPSEVKPLRIFMLEDVSRERRLDLLKKWRNKGGVFLMGYAAFRNL
SLGRGVKDLNAAREICSALRDGPDILVCDEAHIIKNTRADTTQALKQVKCQRRIALTGSP
LQNNLMEYYCMVDFVREGFLGSSPEFRNRFQNPIENGQHMNSTAEDVKIMNQRSHILYEQ
LKGFVQRMDMNVVKKDLPPKTVFVISVKLSPLQRKLYQRFLRLYGFSDGRADERMRKNFF
AAYQVLAQILNHPGIPQLRREDSKNGRRGSIVDIPDDCSSEENTDYNMVTGEKQRTMNDL
QDKVDGYLQKDWWVDLLQKNNYKVAEYSGKMILLLDILSMCADVGDKALVFSQSIPTLDL
IELYLSRVPRHGKQGKFWKKGKDWYRIDGKTESSERQKLVDRFNEPDNKRVKCTLISTRA
GSLGINLYAANRVIIVDGSWNPTYDLQAIFRAWRYGQKKPVFAYRLMARGTIEEKIYKRQ
VTKEGLAARVVDRQQVHRTISKEEMLHLFEFDDDDEKSDTVTEISKQNEVAQCNLVENSQ
KQKATLPRVGCDKLMESLLQRHGPNWISNFHEHETLLQENEEERLTKEEKDMAWEVYRRA
LEWEEVQRVPLSESPVLPKPSPSVQTEPVRMPKLFNRSRFVIRNCTRTAHQLTLISQGIR
VGNSTFCGECGRVLTWADVLPAAKPSEVN
NT seq 4410 nt   +upstreamnt  +downstreamnt
atggagccaaatgaaggaaaagggaaggatcaaggtgaaaagccagaggagaaggtgtat
acagtggaggcaacagaggatgtgatggatataacagacgaaataatggaggtagaccag
gagatgatggaggcaaagcttgaagaggtgatgaaagctagagatgagagaggggagcac
attgatgtgcagatggaagaaaataacaatcaggatgggcaaaaagatgaggatatgcaa
gccactgagagtatatcggaaagttctgaattcagttcagaagaagatgaacaattgctg
ttgggacgagatgatgacttggatcatgagaaacctctgagcgaggaagaaatagaagag
ttaatttcagattttttgggagttgagagtaaggctgcagatgctcaagaagcacttgaa
aaggagtctctttctaatgtagagagtgaagttaggaaggaattatcacaaacactcagt
ggtgaagagttgaataaagctgttgctgctgaaatgatgacttttaaagatgaatgggag
gcaactcttgatgagcttgaaacagaaagcgcaaacctgttggagcaacttgatggtgca
ggaattgagcttccaaaattatatgagatgatagaaagtcaagcccctaatggttgccac
actgaagcttggaaacaaagagcccactgggttgggactcaggtgacaaaagaaactgtg
gaatcattggctaacgctgagaggtttcttcacactcaccggcctgtccgaaaacgacat
ggaaaacttttggaggagggagctagtggttttctggagaaaaagcttgctgatggtgct
gccaaagaatctctagctggaacatctgaacttgactggtcgtctctaaacaaagttttt
tcggaaaaaagggatgagtctatttcctttggtagtaaggattgggcgtctgtttacttg
gcaagcactccacaacaagctgcagccatgggattagaatttccaggagtcaatgaggta
gaggaaattgaagagattgatgcaggcttggcagatccatttttggccgatgcaatagaa
aatgaaagagaacttcccctttctgaagaacaaaagaaaaattatataagggtcaaagaa
gaggatgatttaaatagtgatcgtgaacttcaacttcgtttgaaacggaagagacgcagt
aaaagatctaaacaggttatcaggtgtacggcagagaatatggatgatgactgtgtgtat
ttgaatgggaattatattgcccaaagttctggtgaagatcgagtaaaaattcctgagacc
agcactcaagttcataacaatgaagtcaacagagtggaaaacgggaaattgtctaattca
gatgttgataccatgagagatgattcacataatccagcaaacagttttaggtgtactgcc
tgtaataacgtagctgtggaagtgcatactcacccccttttggaagtaatagtttgcatg
gattgtaaacgttcaattgaagatagagttgcgaagattgaagactcttcggaacgtagt
tgtgaatggtgtggtcatattactgacttaatagattgtaggacatgcgaaaaacttttc
tgtgcctcatgtataaagaggaatatcggtgaagaatacttgtctgaagctcagtcctct
ggttgggattgttgttgctgctctccaatgcccttgcaaagattgacactagaactggag
aaagccattagggataagaagtcagtagagttgagttctgattccagctctgattctagc
tctgattccagctctgataacaattcggctgatgttaatgtagcaatcagcttaaagaag
aaatcaaaaaagagaattcggcggataattgatgatgctgaactagggaaagatacgaga
agaaaaattgcaattgaaaaggaacggcaggagcgtcttaggtccttgcagttttctgcc
agatacaaaacaattagctctatgggagacctgaaatctattcctgaaggtgcggaagtt
gaggttcttggtgatgctcacagtggttacatagtgaatgtggctagggagattggtgaa
ggagctgtgagggttccttgtagcatatctgccaaactaaaagtccatcaggtaaccggg
attagatttatgtgggaaaatattattcagtctatcagcagagtaaagtcaggtgataaa
ggccttggctgcattctagctcatacaatgggcctgggcaaaacttttcaggttatagcg
ttcctgtacaccgcaatgagatgtgttgatttggggttgaaaactgctcttattgtgact
cctgtaaatgtgttgcacaattggcgaagtgaattcatgaagtggatgccatcagaagta
aaaccacttcgcattttcatgcttgaagatgtttcaagggagaggagattggacttgcta
aaaaagtggcgaaataaggggggagttttcttgatgggatatgcagcttttagaaacctg
tctcttgggaggggggtgaaggatttgaatgcggccagagagatctgtagtgccttgagg
gatggacctgatatacttgtttgcgatgaggctcacattattaagaacaccagggctgac
acaacgcaagctttgaagcaagttaaatgccagagaagaattgccttaactgggtcaccc
cttcaaaacaatctcatggaatattattgtatggttgattttgtcagagaaggattcttg
gggagtagtcctgagtttagaaatcggttccaaaatccaatagaaaacggacagcatatg
aattctactgcggaggatgtaaaaattatgaaccagagatcacacattctgtatgagcaa
ttgaaaggatttgtgcaaagaatggacatgaatgtggtgaaaaaggatctgccacctaaa
acagtcttcgtaatatctgtcaagctatcgcccttgcagcggaaattgtatcagagattt
cttaggttatatgggttcagcgatggaagagcagatgaaagaatgagaaaaaactttttc
gctgcttaccaggtcttggctcagattttaaatcatccagggattccgcaattaagaaga
gaggatagcaagaatggtcgtcgtggtagcattgttgatattccagatgactgctcaagt
gaagaaaatacagactacaacatggttacgggagagaaacaaagaactatgaatgatttg
caagataaagttgatggctacctccagaaggattggtgggtcgacctacttcaaaaaaat
aattataaggtggcggagtatagcggcaaaatgattttgctattggatattttatccatg
tgtgctgatgtgggggataaggcgcttgtgtttagccagagtatcccgacactggatctc
atagaactatatctttcaagagtacctcggcatggaaaacaaggaaagttctggaaaaag
ggaaaagactggtacagaattgatggaaaaactgaaagctcagaacggcagaagttggtt
gataggtttaatgagcctgataacaaaagggtgaaatgcactctaatttcaaccagagcg
ggatcgcttggaattaatctttatgctgctaaccgtgtgatcatagttgatggttcatgg
aatccaacctatgatcttcaagctatatttcgagcatggaggtatggtcaaaagaaacca
gtatttgcatacaggttgatggcacgtgggactattgaagaaaagatatataaacgtcag
gtgaccaaggaggggctagctgcgagagtggtggatagacaacaagtgcacaggactatc
tccaaagaagagatgttacacctttttgaatttgacgacgatgatgagaaatctgacacc
gtaactgagataagcaagcaaaatgaagtggctcaatgcaatctggtggagaattcacag
aaacagaaggccactttacctcgtgttggctgtgacaaattgatggagagcttgctacag
agacacgggccaaactggatttccaatttccatgagcacgagacattgttacaagagaat
gaggaggaaagactgacaaaggaggaaaaagacatggcctgggaagtttacaggagggcg
cttgaatgggaagaagttcagcgggtaccacttagcgaatctccagtgctcccaaaacct
tctccttctgtacaaacagaacccgtacgcatgccaaagttgttcaacagaagtcgtttt
gtgattcgtaactgcaccagaactgctcaccagcttactctcataagccaaggaataaga
gtggggaatagcacgttctgtggggagtgtgggcgcgtgttaacatgggcagacgtttta
cctgcagctaaaccttcagaggtaaactaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (5)   
   RefSeq(nuc) (3)   
   GenBank (1)   
   EMBL (1)   
Protein domain (4)   
   Pfam (4)   
All databases (20)   

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