KEGG   Camelina sativa (false flax): 104741582
Entry
104741582         CDS       T05044                                 
Name
(RefSeq) DNA-directed RNA polymerase I subunit 2 isoform X2
  KO
K03002  DNA-directed RNA polymerase I subunit RPA2 [EC:2.7.7.6]
Organism
csat  Camelina sativa (false flax)
Pathway
csat03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:csat00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    104741582
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:csat03021]
    104741582
Enzymes [BR:csat01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     104741582
Transcription machinery [BR:csat03021]
 Eukaryotic type
  RNA polymerase I system
   RNA polymerase I
    Core subunits
     104741582
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_3 RNA_pol_Rpb2_7 RNA_pol_Rpa2_4 RNA_pol_Rpb2_2
Other DBs
NCBI-GeneID: 104741582
NCBI-ProteinID: XP_010460770
Position
14:complement(15249632..15257975)
AA seq 1190 aa
MVVNAKDSTVPNVEDFRELHNLVTHHIESFDYMTDKGLDVMFNRIKPVTVYDSDSDNNLS
IWLENPVVFAPQKESSSSTSRKESLFPFEARQAKISYTGTFMADVCFKYNDEVVVRDKFD
FGQFPIMLMSKLCSLRGADCRKLLKCKESTSEMGGYFVLNGIERVFRCVIAPKRNHPTSM
IRNSFRDRREGYSDKAVAIRCVRDDQSSVTVKLYYLRNGSARVGFWIGGREYLLPVGLVL
KALIETNDEEIYKCLNCCYNENYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKH
LGEHFQPVLDGLEKEKYPTVAEAVLRDFIFVHLDNDDDKFNLLIFIIQKLYSLVDQTSLP
DNPDSLQNQEILVPGHLITIYLKEKLEDWLRKCKSLLKDELHNKSSKSKFSFESLADVKK
VINKNPPRSIGTSIETLLKTGRMNTQSGLDLQQRAGYTVQAERLNFLRFLSFFRAVHRGA
SFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTRISRITSQFDSKGNIRDFLKI
RKSVVEVLVGVGMVPSLPKLVRAAPPEVIHVLLDGQVVGTLSSNVVTDVVSYLRRLKVEA
PSVIPEDLEVGYVPTSMGGSYPGLYLASCPARFIRPVKNISIPSENIELIGPFEQVYMEI
SCPDGGNGGRNNSCSATHEEIHPTGMISVVANLTPWSDHNQSPRNMYQCQMAKQTMAYST
QALQFRADQKIYHLQTPQSPVVRTKTYTTYSIDENPTGTNAIVAVLAHTGFDMEDAMILN
KSSVERGMCHGQIYQTETIDLSDQNSRYDSGHKSFRRSHADKSVHSSIDADGLPYVGQKI
YPDEPYYSVYDEVTSRIRTTRRKGTDPVIVDFVSVDMKSKKHPQKANIRFRHARNPIIGD
KFSSRHGQKGVCSQLWPDVDMPFNGVTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGSL
HGKFVDATPFRNAMKKPNGDKESKSSLLVDDLGSMLTEKGFNYYGTEKLYSGLLGVELEC
DIFMGPVYYQRLRHMVSDKFQVRSTGQVDQLTHQPIKGRKRGGGIRFGEMERDSLLAHGA
SYLLHDRLHTSSDHHIADVCSLCGSLLTSSIVNVQQKKLIQVAGKLPPGRTPKKVTCHSC
KTSKGMETVAMPYVFRYLAAELASMNIKMTLQLSEREGATDEDLIPEEEK
NT seq 3573 nt   +upstreamnt  +downstreamnt
atggttgtgaacgcgaaagactcgacggttcctaatgtcgaagacttcagggagcttcac
aatctcgtcacacatcatatagagtcgttcgattacatgacagataaaggtctcgatgtt
atgttcaatcgaatcaaaccggttactgtctacgattcagactccgacaacaacttgagc
atttggttagagaatcctgtagtattcgctcctcagaaggagagttccagttcaacatca
aggaaagagtctttgtttccctttgaggctaggcaggcgaagatttcgtatacaggaacg
tttatggctgatgtttgctttaagtataatgatgaagttgttgtcagagacaaatttgat
tttgggcaatttcccattatgcttatgtcaaagctttgcagcttaagaggtgctgattgc
cggaaactgttaaagtgtaaagagtcaacttctgaaatgggagggtactttgttttgaat
gggatcgagagagttttccgatgtgttattgcacctaagcgaaaccatccaacaagtatg
atccgaaactcattccgtgatcgtcgggaaggatacagtgacaaggcagttgccattagg
tgtgttagggacgaccagtcatctgtcactgttaaactgtattatcttcgcaatggaagt
gccagagttggattttggataggaggaagggaatatttgcttcctgtcggtcttgttctc
aaggctctcattgaaaccaacgatgaggaaatatataaatgcctgaactgttgctacaat
gagaattatggaagaggcgatggagctattggaacccaactcgttcgtgagagagccaaa
attattcttgatgaagtgcgagacttgggtctttttacccgggaacagtgccggaagcac
ttaggagaacattttcaacctgttcttgatgggttagaaaaagaaaaatatcctactgtt
gctgaagctgtgctcagggattttatatttgttcatcttgacaatgatgacgacaagttc
aatttgctcatcttcataattcagaagctctattctttggtggatcagacttctttacct
gacaatccggattctttgcaaaatcaggaaattttggtcccaggtcaccttataactatt
taccttaaggaaaaacttgaagattggctgcggaagtgcaaaagtcttcttaaagatgag
ttgcataacaagagttcgaaatcaaaattttcctttgaaagccttgctgatgtcaagaag
gttattaacaaaaatcctcccaggagtattggtacgtcaattgaaacattgttgaagaca
ggaagaatgaatacccagtctggtttggatttacagcagagagcaggttacactgttcag
gctgagagattgaactttctccgtttcctttcatttttccgggcggttcatcgaggtgct
tcttttgctggacttcgtacaacaactgtgaggaagctgcttcctgaatcttgggggttt
ctttgccctgttcacactcctgatggggaaccttgtggattactgaatcatatgactcgt
attagccgaatcacttctcagttcgattccaaaggaaacatccgggattttctgaaaata
agaaagtcagttgttgaggttcttgttggggtgggtatggtaccttcattgccaaagcta
gtacgagcggcaccaccagaagtcattcatgttcttttagatggtcaagttgtaggcacg
ctatcttctaacgtagtcacggacgttgtctcctatttgcggagactgaaagtggaggct
ccttcagtgattcctgaagacctcgaagtgggatatgtacctacaagcatgggtggatct
tatcctggattgtatttggcatcatgtcctgcaagattcattaggcctgttaaaaatata
tctataccttctgaaaatattgaacttattggaccgttcgaacaggtttatatggaaata
agctgtcctgatggaggaaatggaggaaggaataactcttgctcagcaactcacgaagaa
attcatccaactgggatgataagtgtggttgctaatcttacaccttggtcagatcataac
caaagtccgcgtaacatgtatcagtgtcagatggcgaaacaaaccatggcatattctact
caagctctccaatttcgtgccgaccagaagatttaccatttgcagactcctcaatcccct
gttgtgcgtaccaaaacatacaccacttacagtattgatgagaatcctacagggactaat
gcaattgttgctgtcctcgctcatacaggatttgatatggaagatgctatgattttgaac
aaatcatctgtggagcggggaatgtgccatgggcaaatataccagacagaaactattgat
ctatcagatcagaatagccgatatgatagtggtcataaaagttttaggaggagtcatgct
gacaaatcagttcattctagtatcgatgctgatgggttaccatatgttgggcagaaaata
tatccagatgagccgtattatagtgtctatgatgaggtaactagcagaataaggaccacg
aggcgaaaaggtaccgaccctgtcatagttgactttgtctctgttgacatgaaaagcaag
aaacatcctcaaaaggcgaatattcgtttccggcatgcaagaaaccccataattggagac
aagttcagtagtagacatgggcaaaagggtgtttgttcccaattgtggcctgatgttgat
atgccgtttaatggagttactggaatgcgtccagatctgatcattaaccctcatgctttc
ccatcaagaatgacaattgctatgcttttggaatctattgctgctaagggaggtagtctg
catggaaagtttgtcgatgcaacgccgtttcgtaatgcaatgaaaaaaccaaatggagat
aaggagagcaagtccagtttgcttgttgatgatctcggttccatgttaactgaaaaaggg
ttcaactactatgggactgagaaattatatagtggacttttaggagtagaactggagtgt
gatatatttatgggtcctgtttactaccaaagattgcgtcacatggtctcagacaaattc
caggttaggtccactggacaagtggatcaactaactcatcagccaatcaagggaaggaaa
cgaggtggagggattcggtttggtgaaatggaaagagactcactacttgctcatggagct
tcctatctattacacgacaggcttcacacttcttcagatcaccacattgcagatgtatgt
tcactgtgtggaagcttgctcacttcgtctattgtgaacgttcaacagaagaagctaatt
caagttgctggaaagttacctcctggtagaactccaaagaaggtaacttgccattcctgt
aagacaagtaaaggcatggagacagttgcaatgccatatgtgttcagatacttggctgca
gagttggcttcaatgaatattaagatgactcttcagttgagcgagagagaaggagcaacc
gatgaagatttaataccagaggaagaaaaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (6)   
   Pfam (6)   
All databases (24)   

Download RDF
DBGET integrated database retrieval system