KEGG   Camelina sativa (false flax): 104758485
Entry
104758485         CDS       T05044                                 
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform isoform X1
  KO
K04354  serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
csat  Camelina sativa (false flax)
Pathway
csat03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:csat00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    104758485
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:csat01009]
    104758485
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csat03019]
    104758485
   03036 Chromosome and associated proteins [BR:csat03036]
    104758485
Protein phosphatases and associated proteins [BR:csat01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-2 (PP2A)
    Regulatory subunits
     104758485
Messenger RNA biogenesis [BR:csat03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Protein phosphatase 2A
     104758485
Chromosome and associated proteins [BR:csat03036]
 Eukaryotic type
  Centromeric chromatin formation proteins
   Other centromeric chromatin formation proteins
    PP2A (protein phosphatase 2A)
     104758485
SSDB
Motif
Pfam: WD40 ComGF DUF4213
Other DBs
NCBI-GeneID: 104758485
NCBI-ProteinID: XP_010479664
Position
17:31090473..31094982
AA seq 498 aa
MNGGDEVVAASADPSLPLEWRFSQVFGERGAGEEVQEVDIISAIEFDNSGDHLATGDRGG
RVVLFERTDANNSSGGTRRDLEETDYPLRHPEFRYKTEFQSHDPEFDYLKSLEIEEKINK
IRWCQTANGALFLLSTNDKTIKFWKVQDKKIKKICDMNSDPSRTVGNGTVASPCFVNGGV
PEVNSSPGGISSLRLPVVVTSHESSPVARCRKVYAHAHDYHINSISNNSDGETFLSADDL
RINLWNMEINNQSFNIVDVKPAKMEDLSEVITSAEFHPTHCNMLAYSSSKGSIRLIDLRQ
SALCDSHSKLFEEPEAAGPKSFFTEIIASVSDIKFAKEGRYLLSRDYMTLKLWDINMDSG
PVATFQVHEYLKPKLCDLYENDSIFDKFECCISGNGLRAATGSYSNLFRVFGVSPGSTES
ATLEASRNPMRRHVPIPSRPSTALSSITRVISRGSESPGVDGNSNALDYATKLLHLAWHP
NENSIACAAANSLYMYYA
NT seq 1497 nt   +upstreamnt  +downstreamnt
atgaacggtggtgatgaggtcgtcgcagcttcagcagacccatctctgcctttggaatgg
agattctctcaggtcttcggtgaacgaggcgctggtgaagaagttcaagaagttgatata
atctcagcgattgaatttgataattctggtgaccatcttgctactggtgaccgtggagga
cgtgttgttcttttcgagagaactgatgccaataatagcagtggtggaaccagaagggat
cttgaagaaactgattatccactgaggcatccggagtttcgttataaaacagagtttcag
agtcatgaccctgagtttgattatctcaagagtttggagatagaggagaaaattaacaaa
attagatggtgtcaaacagcaaatggagctctttttctcctctcgacgaatgacaagacc
atcaagttttggaaggttcaagacaagaagatcaagaaaatttgtgatatgaattcagat
ccttcaagaactgtaggaaatggaaccgttgcaagcccatgctttgtgaatggaggagta
cctgaagtgaacagctcacccggaggcatctcttctctgcgattaccagtggtagtaact
agccatgagtcgagccctgtggctagatgtcggaaagtgtatgctcatgctcatgattat
cacatcaattcaatctcaaacaatagtgacggcgaaacatttctctctgctgatgatttg
cgaatcaatctttggaatatggagatcaacaatcaaagtttcaatattgttgatgtcaag
cctgcgaaaatggaagatctatctgaggttatcacatcagcagaatttcatcctacccat
tgcaatatgttagcctatagcagttcgaaaggttcaattcgcctgattgatctgcgccaa
tcagctttatgtgattcgcattccaaattgtttgaggaaccagaggcagcaggtcctaaa
tcgttcttcactgagataattgcttcagtctcagacatcaaatttgcaaaagaaggaaga
tatctacttagccgtgactacatgacacttaagttatgggacatcaacatggactcgggt
ccagtagcaactttccaggttcatgaatatttgaaaccaaagctctgtgatttatatgaa
aatgattccatctttgacaagttcgagtgttgtataagtggcaatggattacgagcagct
acaggttcttacagcaatctgttccgtgtgtttggtgtttccccgggaagtactgagagt
gcaaccttagaagcaagcagaaacccaatgaggagacatgtcccaattccttcgaggcca
tccaccgcactaagcagtataacgcgggttataagtagaggatcagagagtcctggagtt
gatggaaatagcaatgctcttgattacgcaacaaagctgctgcatcttgcttggcatccg
aatgagaactcaattgcttgtgccgctgcaaatagcttgtacatgtactatgcctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (3)   
   Pfam (3)   
All databases (21)   

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