KEGG   Camelina sativa (false flax): 104764799
Entry
104764799         CDS       T05044                                 
Name
(RefSeq) probable E3 ubiquitin-protein ligase RHC1A
  KO
K11982  E3 ubiquitin-protein ligase RNF115/126 [EC:2.3.2.27]
Organism
csat  Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:csat00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:csat04131]
    104764799
   04121 Ubiquitin system [BR:csat04121]
    104764799
Enzymes [BR:csat01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     104764799
Membrane trafficking [BR:csat04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab associated proteins
    104764799
Ubiquitin system [BR:csat04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    104764799
SSDB
Motif
Pfam: zf-RING_2 zf-C3HC4_2 zf-RING_UBOX zinc_ribbon_9 zf-RING_11 zf-rbx1 zf-C3HC4 Rad50_zn_hook zf-C3HC4_3 zf-RING_5 zf-ANAPC11 zf-Nse Prok-RING_4 UBZ_FAAP20 ADD_DNMT3 zf-C3H2C3 Vps39_2 zf-RING_16
Other DBs
NCBI-GeneID: 104764799
NCBI-ProteinID: XP_010486701
Position
19:complement(4669531..4671187)
AA seq 190 aa
MTTTSRKNTHWCNTCRRGVRLQGEGRRGGACIHCGDTFLERLYENVELSPFDFFGLAFEE
ARNRGNNRRSVLGGDQLSFEELFNRLSTQDRRGPPPASLAAINTLQKIKIRQKHLGNLDL
CCPVCQDRFEIGSDARKMPCKHIYHSECIAPWLVQRNSCPVCRKELPQDRNNGWKKPLMY
LWPFRSSGLA
NT seq 573 nt   +upstreamnt  +downstreamnt
atgaccacgaccagccgtaaaaacacacattggtgtaacacttgtagacgaggagtacgt
cttcaaggagagggaagaagaggaggagcttgcattcactgtggtgacacctttcttgaa
aggctatatgagaacgtggaactaagcccttttgatttctttggattagcctttgaagaa
gctcgtaaccgtggcaacaacagaagatcggttcttggaggagaccaactaagtttcgaa
gagctgtttaaccgtctgtcaacgcaagaccgtcgcggtcctcctcccgcttcactagcc
gcgatcaacacgttgcaaaagatcaaaatcaggcagaagcatctcggtaatttggatctg
tgttgcccggtttgtcaagaccggtttgaaataggatcggatgcaagaaagatgccgtgt
aaacacatctaccactcggaatgtatagccccgtggttagtccagcgtaattcttgcccg
gtttgtcgcaaagaactgccacaagaccggaataatggctggaaaaagccattgatgtat
ctgtggccgtttaggtcttctggtttggcctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (18)   
   Pfam (18)   
All databases (32)   

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