KEGG   Camelina sativa (false flax): 104768449Help
Entry
104768449         CDS       T05044                                 

Definition
(RefSeq) probable mediator of RNA polymerase II transcription subunit 37c
  KO
K03283  heat shock 70kDa protein 1/2/6/8
Organism
csat  Camelina sativa (false flax)
Pathway
csat03040  Spliceosome
csat04141  Protein processing in endoplasmic reticulum
csat04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:csat00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104768449
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    104768449
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    104768449
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:csat01009]
    104768449
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:csat03041]
    104768449
   03009 Ribosome biogenesis [BR:csat03009]
    104768449
   03110 Chaperones and folding catalysts [BR:csat03110]
    104768449
   04131 Membrane trafficking [BR:csat04131]
    104768449
   03051 Proteasome [BR:csat03051]
    104768449
   03029 Mitochondrial biogenesis [BR:csat03029]
    104768449
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:csat04147]
    104768449
Protein phosphatases and associated proteins [BR:csat01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-5
    PP5-interacting proteins
     104768449
Spliceosome [BR:csat03041]
 Complex B
  Other components
   Prp19 complex
    104768449
 Complex C
   Prp19-CDC5 complex
    104768449
Ribosome biogenesis [BR:csat03009]
 Eukaryotic type
  Pre-60S particles
   Export and cytoplasmic maturation factors
    104768449
Chaperones and folding catalysts [BR:csat03110]
 Heat shock proteins
  HSP70 / DNAK
   104768449
Membrane trafficking [BR:csat04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Other core components
    104768449
 Autophagy
  Chaperone mediated autophagy (CMA)
   Chaperones
    104768449
Proteasome [BR:csat03051]
 Eukaryotic proteasome
  Assembling factors
   Other assembling factors
    104768449
Mitochondrial biogenesis [BR:csat03029]
 Mitochondrial protein import machinery
  Endoplasmic reticulum membrane and cytosol
   Other ER-memrane and cytosol factors
    104768449
Exosome [BR:csat04147]
 Exosomal proteins
  Proteins found in most exosomes
   104768449
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: HSP70 MreB_Mbl FGGY_C
Motif
Other DBs
NCBI-GeneID: 104768449
NCBI-ProteinID: XP_010490742
Position
20
AA seq 654 aa AA seqDB search
MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKN
QVAMNPVNTVFDAKRLIGRRFSDASVQSDRKLWPFTIISSGTAEKPMIVVNYKGEEKQFS
AEEISSMVLIKMREISEAYLGTTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVLRIINE
PTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDF
DNRMVNHFVQEFKRKSKQDITGLARPLRRLRTACERAKRTLSSTAQTTIEIDSLYGGADL
FAPITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHEVVLVGGSTRIPKVQQLLQDF
FNGKELCKSINPDEAVAYGAAVQGAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTTL
IQRNTTIPTKKEQVFSTYSDNQPGVLIQVFEGERARTKDNNLLGKFELSGIPPAPRGVPQ
ITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKSEDEEHK
KKVEAKNALENYAYNMRNTIQDEKIGEKLPAADKKKIEDSIEQAIQWLEGNQLAEADEYE
DKMKELEGVCNPIIAKIYQGGAGGEAGGPGAAGMDYDEAPPASGGAGPKIEEVD
NT seq 1965 nt NT seq  +upstreamnt  +downstreamnt
atggctggtaagggagaaggtcctgcgatcggtatcgatcttggtactacctactcttgt
gttggagtttggcaacacgaccgtgttgagatcattgctaatgatcagggtaaccggacc
acgccgtcttacgttgctttcaccgacaccgagaggctgatcggagatgctgcgaagaac
caggtcgccatgaaccctgttaacactgtcttcgatgcaaagaggttgattggtcgtaga
ttcagtgacgcatctgttcaaagcgacaggaagttgtggcctttcacaatcatctcttca
ggaactgctgagaaaccaatgatcgtagtcaactacaagggtgaagagaaacagttttcc
gctgaggagatctcttcaatggttctcattaagatgcgtgagattagtgaagcttacctt
ggcactactatcaagaacgctgtggtcactgttcctgcttacttcaatgactctcagcgt
caagccacaaaggatgctggtgtcatcgctggtttgaatgttctgcgtatcatcaacgag
cccactgctgctgccattgcctacggtcttgacaagaaggccaccagcgttggagagaag
aacgttctcatctttgatcttggtggtggtacttttgatgtctctcttcttacaattgaa
gaaggtatctttgaggtcaaggccactgctggagacactcatcttggtggtgaagatttc
gataacagaatggttaaccactttgttcaagagtttaagaggaagagcaagcaggacatc
actggcctcgcaagaccccttaggaggctgagaacagcttgcgagagagcaaagagaact
ctttcttccacggcgcaaacgaccatcgagattgactctctctatggaggagctgacctc
tttgctccaattacccgtgctagattcgaagagcttaacatggatcttttcaggaagtgt
atggagcctgttgagaagtgtctccgtgatgctaagatggacaagagctcagtccatgaa
gttgttcttgtcggtggttccacccgtatccccaaagttcaacagcttctccaagatttc
ttcaatggtaaagagctctgcaagtctatcaaccctgacgaggctgttgcatacggtgca
gccgtccagggagctattctcagcggtgaaggaaacgaaaaggttcaagaccttctcttg
ctcgatgtcactcctctctccctcggtcttgaaactgctggtggtgtcatgaccactttg
atccagagaaacacaaccatcccgaccaagaaggagcaggtcttctccacttactcagac
aaccagcccggcgtgttgatccaggtgttcgaaggtgagagagccagaaccaaggacaac
aaccttctcggtaaattcgagctctctggaatccctccggctccacgtggtgtgcctcag
atcactgtctgctttgacattgacgccaatggtatcctcaacgtatctgctgaggacaag
accaccggacagaagaacaagatcaccatcaccaatgacaagggtcgtctctccaaggat
gagatcgagaagatggttcaagaggcagagaagtacaagtctgaggacgaggaacacaag
aagaaggttgaagcaaagaatgctcttgaaaactacgcttacaacatgaggaacaccatc
caggacgagaagattggtgagaagcttcccgcagcagacaagaagaagattgaggattcg
attgagcaggcgattcagtggctcgagggtaaccagttggctgaggctgatgagtacgaa
gacaagatgaaggagttggagggtgtttgtaatccgatcatcgccaagatttaccaagga
ggagctggtggtgaagccggtggtcctggagctgctggaatggactacgatgaagctcct
cctgcctcaggtggtgctggccccaagatcgaggaagtcgactaa

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