KEGG   Camelina sativa (false flax): 104768834
Entry
104768834         CDS       T05044                                 
Name
(RefSeq) paired amphipathic helix protein Sin3-like 6 isoform X1
  KO
K11644  paired amphipathic helix protein Sin3a
Organism
csat  Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:csat00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:csat03036]
    104768834
Chromosome and associated proteins [BR:csat03036]
 Eukaryotic type
  Histone modification proteins
   HDAC complexes
    Sin3A-HDAC complex
     104768834
    REST complex
     104768834
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    104768834
SSDB
Motif
Pfam: Sin3a_C PAH Sin3_corepress Dala_Dala_lig_N
Other DBs
NCBI-GeneID: 104768834
NCBI-ProteinID: XP_010491200
Position
3:4506818..4513580
AA seq 1122 aa
MKRLREDVQPEPEPQKRRAEVSSRGETNKQPKTLDALTYLKSVKDIFHDNKEKYESFLEL
MKDFKAQRINTEGVIERIKELFKGYKNLLLGFNTFLPKGYKITLQPEEEKPKVRVDFKDA
IGFVTKINTRFGDDEHAYKSFLDILNMYRKERKSISEVYKEVTMLFKGHEDLLMEFVNFL
PNCLESAPSATKAVHRHKGTATSGMHSDKKLKLRCKLEDNSEHSDQREDGDENLVACSPD
SLVKEGRPGDFQDDENREDTETDTADRTEKSAASGSKDIGNHRPTTPYVGTPINELDLSE
CTQCTPSYRLLPKDYAVEIPSYRNTLGKKTLNDHLVSVTSGSEDYSFSHMRKNQYEESLF
RCEDDRYEMDMLLGSVSSAIKHVEILLEKMNNNTISVDTTICIEKHLSAMNLRCIERLYG
DNGLDVMDLLKKNMHSALPVILTRLKQKQEEWARCHSDFQKVWAEVYAKNHHKSLDHRSF
YFKQQDSKNLSTKCLVAEIKDISEKKHQEDLLQAIAVRTMPSFTPDLEFDYCDTQIHEDL
YLLIKYYCEEICATEQSDKVMKLWITFLEPMFGTLSRSQGDLAMEDVSKLKTNQELHDAC
VAVKDSSSGSKGKHPISPKLLKDNPTMQGSSPGKDVSANIMKGAQHDKLQDDTDMSYEVI
QSTKLVSARNDQIMEDVSVVNHEAEREEGELSPTNSCEQGNFDVSGQNGLKPLQRVMDNV
TSNTYQQSCDKKGAYCTETGTKGNTHPEDDENCHKLSEDNETASEKVASGTKSGCHEKHK
EPISVAGEVANGKEGEDGSFAFTERFLQTVKPVAKHVSWPLQASETCSQNDSRVFYGNDS
YYVLFRLHQMLYERIQSAKKHSEKKWKAPDNTTPDSYPRFIDALYNLLDGSSDNTKFEDE
CRAIFGAQSYVLFTLDKLVQKFVKHLHAVAADETDTKLRQLHAYENYRKLGRFVDLVYHE
NARALLHEANIYRIRYSSAKTRLSIQLMNCGNNQPEVAGVAMEPDFANYLQKKFLTSVND
DENHGLFLKRNKEKFTSVNESSGDTIAMEGLSIINEIECKMACSSSKVKYVANTSDLLYR
SKQGKPNSKGPRLKRVSEISKQRRISRFHIMLNCKLCALPPI
NT seq 3369 nt   +upstreamnt  +downstreamnt
atgaagagacttagagaagatgttcaacctgaacctgaacctcaaaagcgaagggctgaa
gtttcatctcgaggagaaacaaacaagcaacctaaaacccttgatgccctgacgtatctc
aaatctgtaaaggatatttttcatgacaataaagagaaatatgagtcattccttgagctc
atgaaggactttaaagctcagagaatcaacactgaaggtgtcatcgaaagaattaaagaa
ttgttcaagggttacaagaacctacttttaggttttaatactttcttgcccaaagggtat
aaaataacccttcagccggaggaagagaaacctaaggtccgggtggatttcaaagacgct
atcggttttgtcaccaagattaatacgaggttcggagatgatgaacatgcgtacaaaagt
tttctagacatcctgaacatgtatagaaaggaaagaaagtccatctctgaggtctacaaa
gaggtcactatgctattcaagggccatgaagatctgctcatggagttcgttaatttctta
cctaattgtctagaatcagctccttcagcaacgaaggcagtacatcgtcacaagggcact
gcaacttctggcatgcattctgataagaaactaaaactgcgatgtaagcttgaggataat
tctgaacactctgaccaacgagaagatggtgatgagaaccttgtcgcttgttcccctgac
tcccttgttaaagaaggtcgtccaggagattttcaagatgatgaaaatagagaagatact
gaaacagatacagcagatagaactgaaaaaagtgcagcatctggcagtaaagatatcgga
aatcacagacccaccaccccgtatgtgggaacacctataaatgaacttgatctctctgaa
tgcactcagtgtacgccaagttatcggctcctaccaaaggattatgcagttgagattcca
agctacagaaatacacttggtaaaaagacactcaatgaccacctggtatctgtcacctcc
gggagtgaagattactcattcagtcatatgcgcaaaaaccagtatgaagaaagcttattt
cggtgtgaggatgataggtatgaaatggacatgttactaggatctgtaagttcagcaatc
aaacacgtggaaatccttctggaaaagatgaacaacaacactatctcagtagacactact
atatgtatcgagaaacacttatcagctatgaacttaagatgcattgagcggttatacggt
gataatgggcttgatgtcatggatcttttgaagaagaacatgcatagtgctttaccggtg
atactgacgcgcttgaagcagaagcaagaagaatgggcaaggtgccactctgatttccag
aaagtttgggctgaagtatatgctaagaatcaccacaagtcactagatcatcgtagtttc
tatttcaagcagcaggactctaagaacttgagcacaaaatgtttagtggcagagataaaa
gatatcagtgagaaaaagcatcaagaagatctgcttcaagctattgctgttagaactatg
ccctcttttactccggatttggagtttgattattgtgatacacaaattcacgaggattta
tatctgctaatcaagtattactgtgaagaaatatgtgccactgaacaatcagataaggta
atgaagctgtggataacctttttggagcccatgtttggcactctttcgaggtctcaaggt
gaccttgctatggaagatgtatcaaagttgaaaaccaaccaagaattgcatgatgcatgc
gtggcagtgaaggacagctcttctgggtcaaagggtaaacatccaatatccccaaaactg
ctgaaagataatccaacaatgcaaggaagctcgcctgggaaagatgtctcagccaatata
atgaaaggtgctcagcatgataaactgcaagatgatacagatatgtcttatgaggttatt
cagtctaccaaacttgtgtcagccagaaacgatcagataatggaggatgtatcagtggta
aatcatgaggctgagcgagaagagggtgaattatctcccactaacagttgtgagcaaggt
aactttgatgttagcggacaaaatggcctcaagcctttacaaagggtgatggacaatgta
acaagcaatacataccagcaaagttgtgataaaaagggagcatattgcactgaaacggga
acaaagggaaatactcaccctgaagatgacgaaaattgtcacaagttatcagaggataat
gagaccgcctctgaaaaggttgcttcaggaaccaagtctggttgtcatgaaaagcataag
gagcctattagtgtggctggagaggtggctaatggaaaagaaggtgaagatggatccttt
gcatttacagagcggtttctgcaaactgtaaaacctgttgccaagcatgtgtcttggcca
ctgcaagctagtgaaacttgctctcagaatgattctcgagttttttacgggaatgattct
tattatgtgctatttaggcttcatcaaatgttgtatgagagaatacaatcagcaaagaaa
cattcagaaaagaagtggaaggctccggataacacaactcctgattcttatcccaggttc
atagatgcactctataatttacttgacggctctagtgacaatacaaagtttgaagatgaa
tgccgagctatttttggagcacagtcatatgttctcttcacattggacaagttagttcag
aagtttgttaagcatctgcatgctgttgcagctgatgagacagacaccaagcttcgacaa
ctacatgcgtatgagaactacagaaaactggggagattcgttgatctagtgtatcatgag
aatgcacgtgccctcctccatgaggcaaacatataccggatcagatattcatcagcaaaa
acacgtctctctattcagcttatgaactgcgggaataaccagcctgaagtagctggtgta
gccatggagccggattttgcaaattatctacaaaaaaagtttctgacatccgtcaatgat
gatgagaatcatggactgtttttgaaaaggaacaaggagaaattcactagtgtaaatgaa
tcttcgggggatacaattgcaatggaaggattgagtattattaacgagattgaatgtaaa
atggcttgcagttcttcaaaggtgaagtatgtagcaaacacatcagatcttttgtataga
agcaaacaggggaaaccgaattcaaagggaccgaggcttaaaagagttagtgaaatttcg
aaacagagaagaatatcgcggtttcacattatgctgaattgcaaactttgtgccttgcct
cctatataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (7)   
   RefSeq(pep) (7)   
DNA sequence (11)   
   RefSeq(nuc) (7)   
   GenBank (2)   
   EMBL (2)   
Protein domain (4)   
   Pfam (4)   
All databases (29)   

Download RDF
DBGET integrated database retrieval system