KEGG   Camelina sativa (false flax): 104769291
Entry
104769291         CDS       T05044                                 
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 22
  KO
K11366  ubiquitin carboxyl-terminal hydrolase 22/27/51 [EC:3.4.19.12]
Organism
csat  Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:csat00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:csat01002]
    104769291
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:csat03021]
    104769291
   04121 Ubiquitin system [BR:csat04121]
    104769291
   03036 Chromosome and associated proteins [BR:csat03036]
    104769291
Enzymes [BR:csat01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     104769291
Peptidases and inhibitors [BR:csat01002]
 Cysteine peptidases
  Family C19: ubiquitin-specific protease family
   104769291
Transcription machinery [BR:csat03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    SAGA/TFTC/STAGA complex
     104769291
Ubiquitin system [BR:csat04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   UBP/USP
    104769291
Chromosome and associated proteins [BR:csat03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    SAGA complex
     104769291
    SLIK complex
     104769291
SSDB
Motif
Pfam: UCH UCH_1 zf-UBP
Other DBs
NCBI-GeneID: 104769291
NCBI-ProteinID: XP_010491762
Position
20:4525194..4527951
AA seq 558 aa
MSARISFLKNPDPCNHLSNYKLRYGTDGYKSFQNLFSCFNDGRIKIKLQEIEIPRCSYCS
VYQKRLYICLICRSISCSSHILLHTQLNKGHDIAIDVERSELYCCACLDQVYDPEFDEVV
VSKQLVGLGMSVKSGADVVVAVRSNKKRRLDSQLIIGSKFLVSPRDRREKWSFPLGLRGL
NNLGSTCFMNAVLQALVHAPPLRNFWLSGQHNRDLCPRRTMGLLCLPCDLDVIFAAMFSG
DRTPYSPAHLLYSWWQHSTNLATYEQQDSHEFFISLLDRIHENEGKTKCLYQDHEECQCI
THKAFSGLLRSDVTCTTCGSTSTTYDPFIDISLTLDSANGFSPADCRKNRYNGGPSVNAT
MPTLSGCLDFFTRSEKLGPDQKLNCQSCGEKRESSKQMSIRRLPLLLCLHVKRFEHSLTR
KTSRKIDSYLQYPFRLNMSPYLSSSIIGKRFGNRMFAFDGEGEYDSSSSSSPSAEFEIFA
VVTHSGMLESGHYVTYLRLKGLWYKCDDAWINEVEEEVVRGCECYMLFYAQEKVIQKAHK
ELSYQVISMADSFPFADC
NT seq 1677 nt   +upstreamnt  +downstreamnt
atgtccgcgaggatttcatttctgaaaaatcccgatccttgcaatcacttatctaattat
aagctaagatatggtactgatggttacaaatcttttcagaacttgttcagttgcttcaac
gatggaaggattaagatcaaacttcaagaaatcgagatacccagatgcagttattgttct
gtttatcaaaagagactctacatctgtttgatctgtcgttcgatttcttgttcaagtcac
atccttttgcatacccagttgaataaaggccatgatatcgccattgatgttgaaagatct
gagctttattgctgtgcttgcttagatcaagtgtatgatcctgagttcgacgaggtggtt
gtctctaagcagcttgttgggttgggtatgtctgttaaatcaggggctgatgttgttgtt
gcggttagatccaacaagaagaggaggttggactctcagttgattataggatctaagttt
ttggtctcacctcgagatcgaagggagaaatggtcgtttcctttggggttaagaggtttg
aataatcttggaagcacttgttttatgaatgctgtgttgcaagcacttgttcatgctcct
cctttgagaaacttttggttaagtggtcagcataatcgtgatctttgtccgagaagaaca
atgggtttgttgtgtttgccttgtgatcttgatgttatctttgctgctatgttttctggt
gataggactccatatagcccagctcatttgctttacagttggtggcagcactcaacaaat
ctagcaacatatgagcagcaggattctcatgagttcttcatttcgctattggaccgtatc
catgagaacgaaggaaagacaaagtgtttgtatcaagatcatgaggagtgtcagtgtatc
actcacaaggcattctctggtcttttaagatcagatgtcacctgcacaacgtgtggatcc
acatcaacgacatatgacccatttatcgacatttcacttacgttagattctgcgaatgga
ttctctcctgctgattgcagaaagaacagatataatggtgggccaagcgtgaatgcaacc
atgccaactctctcaggttgcttagatttcttcacaaggtcagaaaaacttggtccggac
cagaaactaaactgccaaagctgtggagaaaagcgagaatcttcaaaacaaatgtccata
agaagacttcctctgctactttgcttgcacgtaaagcgttttgaacattctcttacccgt
aaaacctcaagaaaaattgatagttacttgcagtatccgttccgcctaaacatgtcacct
tacctctcttcctccatcattggaaagcggtttgggaacaggatgtttgcctttgatgga
gaaggcgaatatgacagttcatcatcttcatctccatcagcggaatttgagatatttgcg
gttgtaactcactcagggatgttggaatcgggtcactatgtgacctaccttaggctgaaa
gggttgtggtataaatgtgatgatgcgtggatcaatgaggttgaagaagaagtggtgaga
ggatgcgagtgttatatgttgttctatgcacaagagaaagtgattcaaaaggctcataag
gagttgagttatcaagttatctccatggctgattcatttccctttgctgattgctaa

  All links  
Ontology (6)   
   KEGG BRITE (6)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (19)   

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