KEGG   Camelina sativa (false flax): 104776178
Entry
104776178         CDS       T05044                                 
Name
(RefSeq) small nuclear ribonucleoprotein SmD3b-like
  KO
K11088  small nuclear ribonucleoprotein D3
Organism
csat  Camelina sativa (false flax)
Pathway
csat03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:csat00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104776178
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csat03019]
    104776178
   03041 Spliceosome [BR:csat03041]
    104776178
   03032 DNA replication proteins [BR:csat03032]
    104776178
Messenger RNA biogenesis [BR:csat03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     104776178
Spliceosome [BR:csat03041]
 Complex A
  U1 snRNP components
   Sm proteins
    104776178
  U2 snRNP components
    104776178
 Complex B
  U1 snRNP components
    104776178
  U4/U6.U5 tri-snRNP components
    104776178
 Complex C
  U2 snRNP components
    104776178
DNA replication proteins [BR:csat03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     104776178
SSDB
Motif
Pfam: LSM SM-ATX
Other DBs
NCBI-GeneID: 104776178
NCBI-ProteinID: XP_010498492
Position
3:9326854..9328453
AA seq 129 aa
MSRSLGIPVKLLHEASGHIVTVELKSGELYRGSMIECEDNWNCQLEEITYTAKDGKVSQL
EHVFIRGSKVRFMVIPDILKHAPMFKRLDARIKGKSSSLGVGRGRAAMRGKPVAGRGTGG
RGAVPPVRR
NT seq 390 nt   +upstreamnt  +downstreamnt
atgagccgaagtttgggaataccggtgaagcttctacacgaggcatcgggtcatatagtg
acggtggagctaaagagcggtgagctctacagaggaagtatgattgagtgtgaggataac
tggaactgccagctcgaggaaattacttacaccgccaaggatggtaaagtatcacagctt
gagcatgtcttcattcgaggcagcaaagtcaggtttatggtcataccagacattctcaag
catgctccaatgttcaagcgtttagatgctagaatcaagggaaagagctcatctctgggt
gttggcagaggtagagctgcaatgcgaggaaaaccggttgctgggcgtggaactggagga
aggggagcggtaccacctgtgaggagatga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (16)   

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