KEGG   Camelina sativa (false flax): 104780017
Entry
104780017         CDS       T05044                                 
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH17
  KO
K15271  ATP-dependent DNA helicase HFM1/MER3 [EC:5.6.2.4]
Organism
csat  Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:csat00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:csat03036]
    104780017
Enzymes [BR:csat01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     104780017
Chromosome and associated proteins [BR:csat03036]
 Eukaryotic type
  Meiosis-specific proteins
   Others
    104780017
SSDB
Motif
Pfam: Sec63 DEAD Helicase_C ResIII HHH_5 Cdd1 DNA_pol_lambd_f HHH AAA_22 T2SSE
Other DBs
NCBI-GeneID: 104780017
NCBI-ProteinID: XP_010502780
Position
4:complement(7094040..7100860)
AA seq 1132 aa
MDTHTLKSVSDLPGNFRSAFSFRYFNSLQSECFPLCFHSDINMVISAPTGSGKTVLFELC
ILRLLSKSISTEGRFLHAKGALKTVYISPSKALVQEKLRDWNHKFNSWGIICLELTGDNE
TYSTRNIQDADIILTTPEKFDAVSRYRVTSGGLGFFSDIALVLIDEVHLLNDPRGAALEA
IVSRIKILSSNHELRSSPLASVRLLAVSATIPNIEDLAEWLKVPTAGIKKFGEEMRPVKL
TTKVFGYAAAKNDFLFEKRLQNYIYDILMQYSKGKSALVFCSTRKGAQEAAQKLAQTAMT
YGYSNPFIKSREQLERLREASPMCSDKQMQSYILQGVGYHNGGLCQKDRSLVEGLFLNGD
IQVICATNTLAHGINLPAHTVVIKSTQHFNKEKGHYMEYDRSTLLQMCGRAGRPPFDDTG
MVIIMTRRETVHLYENLLNGCEVVESQLLPCLIEHLTAEIVQLTISDITRAIEWMKCSYL
YVRMKKNPENYAIKKGIPKDRVEKHLQELCLQKINELSHYQMIWTDTDGFVLKPEEPGRL
MTKYYLKFDTMKYIINAPTGYSLNEALQIVCRAEEISWIQLRRNEKKTLNDVNADREGRL
RFHINDNKGKRKKRIQTREEKLFLLANDWLTGDPSIHDLSMTQDANSICSNGSRIARCMK
EYFIYKKNYKGTLSSTLLAKSLYQKLWDDSPYLLKQLPGIGMVTAKALHSMGVRSFEALA
EADPRRIEIVTGRKYPFGNTIKESLSSLPPKVEIKVEEVDCQKQGISKLAVTLTRLSQPV
QSTKRHYADMIVGSDEENRIHFHEKIRMEDFSSPYSVTILLERPHQQAKATVKADLIFEE
YIGIDLHETLLLKKANNNKINYRSENRLPHYYPPMVDACIVDDDNPATSGPSTRKDKKDE
MPSFKLIDEDSEEEKEPYVTMEEDDCVIINEHTVFDHIREKAKCFPTLKTLNPTSPASRK
SPQKRKSLVENSPELDPLFQYDSVLGLPTRTKDIKQSAQQITSPGYASLADKTGEKERPF
SDETIFNYIRKRSKNSPVVITSRTEDPIAICSQEGSNTEISPYRAYGLLVSPSKKRPGIT
SDAPTEILSFDISMVKGSSTSLEKNKGLCSTLAGKSKESDSFLGFKSVFSFL
NT seq 3399 nt   +upstreamnt  +downstreamnt
atggatactcacacgctcaaatctgtctctgatttgcctggaaatttccgttcagctttt
agcttcagatacttcaactcgcttcagagcgagtgctttccactgtgctttcactccgac
atcaacatggttatttcagcgcctacgggaagtggtaaaaccgttctctttgaactgtgt
attttgaggctcctctctaagtccatctctacggaagggaggtttcttcatgctaaagga
gctcttaaaacagtttacatatctccgtccaaggctttagtacaggagaagctgcgtgat
tggaatcataagtttaattcatggggaatcatttgtttggagctgacaggtgataatgaa
acctacagcacaaggaatatacaagacgcagatattatcttgactacacctgagaaattt
gatgcagtgagccgttatcgcgttaccagtggaggcttaggtttcttcagtgatattgcg
cttgtgctcattgatgaagttcacctgctgaatgatccccgtggagctgctcttgaagca
atagtcagtagaataaagattctttctagcaatcatgaactaaggtcaagtcctttagcc
tccgtgcgtcttctggctgtctcagctactatcccaaacattgaggatttagctgaatgg
ctcaaggttcctaccgcaggaattaagaagtttggcgaagaaatgcgacctgttaagttg
acaactaaagtttttggttatgcagctgccaagaatgacttcctctttgaaaagcgcctc
caaaactatatctatgatattttaatgcaatattcaaaaggaaaatctgcattggtattc
tgctcaacacgaaaaggcgctcaagaggctgcacaaaagcttgctcagactgcaatgacc
tatggttactcaaatccatttattaaaagcagagaacagctagaacgattaagggaggct
tcgccaatgtgcagtgacaaacaaatgcaatcttatatcctccaaggcgttggttatcac
aatggtggactttgccaaaaggaccgcagcctcgtagaagggctcttccttaatggagat
atccaagttatctgcgcgaccaacactcttgcccatggaatcaacctgcctgcacataca
gttgtcataaaatcaactcaacatttcaataaggaaaaaggtcactacatggaatatgat
cgttccacactactacagatgtgtggcagggccggtcgacctccatttgatgacacggga
atggttattattatgacaagacgagagacggtccatctatatgagaatctcttaaatgga
tgtgaggttgttgaatcacaattgctgccatgcttaatagagcacctaaccgcagaaata
gttcaactcactatctctgacattacacgggcaattgagtggatgaaatgctcatacctg
tatgtccgaatgaaaaagaatccagagaattatgctattaagaaaggaattcctaaagat
cgagtagagaagcatttgcaagagctttgccttcagaagatcaatgagctttcccactat
cagatgatctggactgacacagacggctttgttttgaaaccagaagagcccggaaggctg
atgacaaagtattatctaaagtttgacacaatgaagtacattattaatgcaccgacgggc
tatagcttgaatgaggcccttcagatagtatgtcgtgctgaagagatatcttggatacag
ctcagacgcaatgaaaagaagacattaaatgatgtaaatgcagatagagaagggaggctc
agattccacatcaacgataataaaggaaagcggaaaaaacgcatccaaaccagagaagag
aaactgtttctgcttgcaaatgattggttgactggggatccttcaatccatgatttatcc
atgactcaggatgctaactctatttgctcgaacggatccagaatagccagatgcatgaaa
gagtactttatttacaaaaagaattataaaggaactcttagctcaactcttctagcaaaa
tcactctatcaaaagctctgggacgacagcccatatttgctgaaacaattaccaggcatt
ggaatggttacagcaaaggcacttcattcgatgggagtcaggtcatttgaagctcttgct
gaagctgatccacgaaggatagagattgttaccggtcgaaaatatcctttcggaaatacc
atcaaggagtctctatcatccctacctcctaaagttgaaatcaaggtcgaggaagttgac
tgccagaagcaagggatatctaaactagcagtcacattgacacggctatcacaacctgtc
caatccacaaaacgccattatgctgacatgattgttggttcagatgaagagaatcgtatc
cactttcatgagaaaataagaatggaagacttctccagtccatatagcgtaaccattctc
ctggaaaggcctcatcaacaagcaaaggcgactgtgaaggctgatctcatcttcgaagaa
tacattggtattgacctccatgaaacacttctactgaagaaggcaaacaacaacaaaata
aattacagaagcgaaaacaggctgcctcactattatcctcctatggtggatgcctgcata
gtagatgatgacaacccagctacatctggaccttcaacccggaaggataagaaagatgag
atgcctagtttcaagctcatagatgaggattcagaagaagagaaagagccctatgtgacg
atggaagaagatgactgtgtcattatcaatgaacatacagtctttgaccacatacgcgaa
aaagccaagtgttttcccacattgaaaactttgaatccaacctctccagcatcaagaaaa
tcacctcagaaaaggaaaagcttagtggagaattctcctgaactcgatcctctatttcag
tatgattctgtgcttggtttacctacaagaactaaggatatcaaacaaagtgcacagcaa
attactagcccaggttatgcaagccttgcagacaaaactggtgaaaaagaaagaccattc
tcggatgaaacaatattcaactacataaggaaaaggtccaagaactctccggtagtcatc
acatcaagaaccgaagatcctatagccatatgttctcaagaaggaagcaacacagagata
agtccgtatagagcatatggattattggttagtccttcaaaaaaaaggccagggatcaca
tctgatgcacctacagaaattctgtcttttgatatctcgatggtcaagggaagcagcaca
agcttagagaagaataagggattatgctcaacacttgcaggtaagtccaaagaatctgat
tcttttcttggattcaaaagcgtcttctcttttctgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (10)   
   Pfam (10)   
All databases (25)   

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