KEGG   Camelina sativa (false flax): 109126517
Entry
109126517         CDS       T05044                                 
Name
(RefSeq) RNA polymerase II transcription factor B subunit 5
  KO
K10845  TFIIH basal transcription factor complex TTD-A subunit
Organism
csat  Camelina sativa (false flax)
Pathway
csat03022  Basal transcription factors
csat03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:csat00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    109126517
  09124 Replication and repair
   03420 Nucleotide excision repair
    109126517
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:csat03021]
    109126517
   03400 DNA repair and recombination proteins [BR:csat03400]
    109126517
Transcription machinery [BR:csat03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     109126517
DNA repair and recombination proteins [BR:csat03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     109126517
SSDB
Motif
Pfam: Tfb5
Other DBs
NCBI-GeneID: 109126517
NCBI-ProteinID: XP_019085692
Position
9:37133362..37134324
AA seq 72 aa
MVNSIKGVFISCDVPMAQFIAHLNNSLPPSQKFIIQVLKLDTTCMFVKPQAEEMIHSAVI
KFRDQNSYAKTN
NT seq 219 nt   +upstreamnt  +downstreamnt
atggtgaactcaatcaaaggagtcttcatctcatgcgatgttcctatggcgcagttcatt
gcacatttgaacaattcgttgcctccttcgcagaagtttataattcaagtactgaaactg
gacactacttgtatgtttgtgaagccgcaagcagaggagatgattcatagtgccgtcatc
aagttcagggaccaaaactcttacgcaaagacgaattga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (13)   

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