KEGG   Caulobacter segnis: Cseg_4084
Entry
Cseg_4084         CDS       T01221                                 
Name
(GenBank) RNA polymerase, sigma 54 subunit, RpoN
  KO
K03092  RNA polymerase sigma-54 factor
Organism
cse  Caulobacter segnis
Pathway
cse02020  Two-component system
cse02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:cse00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    Cseg_4084
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    Cseg_4084
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cse03021]
    Cseg_4084
Transcription machinery [BR:cse03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     Cseg_4084
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_IclR HTH_3
Other DBs
NCBI-ProteinID: ADG12495
UniProt: D5VPS2
Position
complement(4474842..4476335)
AA seq 497 aa
MALSHRLELRQGQGLVITPQLQQAIKLLQLSNIELDAFVETELERNPLLLRDEGEPAPAV
EGEAERDPSLTQVDGVADTSAGREMDAPAEDVSPGERATGDGAEAEHAGGQIDWSRAGSG
GSFDGESGYENALVDIPTLSTHLRGQLLQAALSPARHAIAEILIDAVDEGGYLRLDVIEL
AARLACKLEMVEEVLTVLQGFEPVGVFARDVRECLALQLKDLNRYDPAMAAMLDHLELLA
KRDMAALRRVCGVDDEDLRDMIAEVRALNPRPGAAYHSEPAETLVPDVMVREGLGGMWHV
ELNTDTLPRVLVDQRYHARVAKGARTDQEKTFVADCMASANWLVKSLDQRAKTILKVASE
IVRQQDGFLVYGVEHLRPLNLKTVADAIGMHESTVSRVTSNKYIATPRGVFELKFFFTSA
IQSSEGGEAHSAASVRHKIKGLVDAEKTEADVHSDDRIVEILKAAGVDIARRTVAKYREA
MRIPSSVERRRQMKEMA
NT seq 1494 nt   +upstreamnt  +downstreamnt
ttggcgctcagccacagacttgagctccggcaaggccagggcctcgtcatcaccccccag
ttgcagcaggcgatcaagctgctgcaactgtcgaacatcgagctcgacgccttcgtcgag
actgagctcgaacgcaatcctctattgctgcgcgacgagggcgagccggcgcccgcggtt
gagggcgaggccgagcgtgaccccagcctgactcaggtcgatggtgtggccgatacgtcc
gctgggcgcgaaatggacgcgcccgccgaagacgtctcgcccggggaacgcgccacgggt
gacggcgccgaagccgagcacgccggcggccagatcgactggtcgcgcgccgggtccggc
gggtccttcgacggcgagagcggctacgaaaacgccttggtcgatatcccgaccctgtcg
acacatttacgcgggcagctcctgcaggccgccctctcacccgctcgccacgccatcgcc
gagatcctgatcgatgcggtcgacgagggcggctatctacgtctcgacgtgatcgagctg
gccgcccggctggcttgcaagctggagatggtcgaggaggttctgacggtcctccagggc
ttcgagcccgtcggcgtcttcgcccgcgacgttcgcgagtgcctggcgctgcagctgaag
gacttgaaccgctacgacccggccatggccgcgatgcttgaccatctggagctgttggcc
aagcgcgatatggcggccttgcggcgtgtctgcggcgtcgacgacgaagacctgcgcgac
atgatcgccgaggtgcgcgcattgaaccctcgtccgggcgcggcctaccacagcgagccg
gccgagaccctggtgcccgacgtcatggtccgcgaaggtcttggcggcatgtggcacgtc
gagttgaacaccgacacccttccccgcgtgctggtcgatcaacgctatcacgcgcgggtc
gccaagggcgcgcgcaccgaccaggaaaagaccttcgtcgccgactgcatggcctcggcc
aactggctggtgaagagcctggatcagcgcgccaagaccatcctgaaggtggccagcgag
atcgtgcgccagcaggacggcttcctcgtctacggggtcgagcatcttcgccccctgaac
ctcaagacggtcgccgatgcgatcggcatgcacgagagcacggtcagccgcgtcacgtcg
aacaagtacatcgccacgccgcgaggggtgttcgagctgaagttcttcttcacctcggcc
atccagtcgtcggaggggggcgaggcccactcggcggccagcgtccgccacaagatcaag
ggcttggttgatgcggagaagaccgaggcggacgtccactccgacgaccgtatcgtggag
atcctgaaggccgcgggtgtcgacatcgcgcgccgcacggtcgccaagtatcgcgaggcc
atgcgcatcccgtcgtctgtcgagcgcagacggcagatgaaggaaatggcctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (14)   

Download RDF
DBGET integrated database retrieval system