KEGG   Cynoglossus semilaevis (tongue sole): 103376634
Entry
103376634         CDS       T04866                                 
Symbol
ell
Name
(RefSeq) RNA polymerase II elongation factor ELL
  KO
K15183  RNA polymerase II elongation factor ELL
Organism
csem  Cynoglossus semilaevis (tongue sole)
Pathway
csem03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:csem00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    103376634 (ell)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:csem01009]
    103376634 (ell)
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:csem03021]
    103376634 (ell)
Protein phosphatases and associated proteins [BR:csem01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     103376634 (ell)
Transcription machinery [BR:csem03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     103376634 (ell)
    Little elongation complex (LEC)
     103376634 (ell)
SSDB
Motif
Pfam: ELL Occludin_ELL Seryl_tRNA_N
Other DBs
NCBI-GeneID: 103376634
NCBI-ProteinID: XP_008305298
UniProt: A0A3P8V2P2
Position
2:17616206..17645589
AA seq 692 aa
MRGASLLLRLFIIAFIEYSLKSVGSSRFTTVCVRARGGNGSKMAALKEEQCYGLSCGRVS
NGSNVSVFHVKLTDSALRAFEGYQSSKVLSLQPLIRFNGNQGKISIPRSENSSELQSFTF
YLSNVGRDNPQGSFDCIQQYITSEGSIQLDCLGGIQDKITVCATDDSYQKARENMAQAEE
ESRSRSAIVIKPGGRYLGKKVQIRKPASVVSDIAPLRRTSRPVIISSSNIKKSATQHRPL
RERLIHLLALKPYKKPELILRLQKDGLSPLDKDSLDSHLQQVANLSGRDSTFTLKDFLFK
EVQKDWPGYTEGDQQLLTRILFRKQCQTQNSSAPPPESPPKELASSSPSQKRPAADFIDP
LINKKPRISHLASKAATAALNGKLNASNGRGETGGGQADAVPMSDSGTTSSSQHLPMLDI
PRPFEALSDVSNDSSHNGRDCDPQESAVSERLSQPLSQFSTALTTPSISTSSSGHSLLDG
TRDKSLVSCNSKSRKKSKKHKEKEKSKEKERKSKDKGRVPEINQEKVEERKSCDEHVPKL
NKACEMSLKNLKSNSISQKSTDLNGMCNRTGIPSSVPEVAEYLVVYTVIDSPEQRQRYKN
DFNAEYSEYRGLHARIESITRQFTVLDNELKQLQQGTEKYKTIHNQILQEYHKIKKTNPN
YNQDKNRCEYLHKKLAHIKRLIAEYDQQQLEK
NT seq 2079 nt   +upstreamnt  +downstreamnt
atgcggggggcgtcactgctgctgcgcctcttcatcatcgcgttcattgaatattcattg
aaaagcgtcgggagttctcgctttacaacagtgtgcgtccgtgcgcgtggtgggaacggt
agcaagatggcggcgctgaaggaggagcagtgctacggactgtcctgtggaagagtgagc
aacggcagcaatgtctctgtctttcacgttaaactcactgacagcgcactgagagcgttc
gaaggctaccaaagcagcaaggtgctgtcactgcaaccattgatcagattcaatggaaat
caagggaaaatttcaataccacggtctgaaaattccagtgaactgcagtcgtttactttt
tacctgtccaatgtgggcagagataacccccagggcagctttgactgcatccagcagtac
atcaccagtgaagggagtattcaactggattgtttgggtggaatccaggacaagattaca
gtgtgtgccacagatgactcataccagaaggccagagaaaacatggcccaggctgaggag
gagagtcgcagtaggagtgcaattgtcatcaaaccagggggaagatacttaggaaaaaag
gtccagatacggaaacccgcgtctgtcgtctcggatattgccccgctgagaagaacttct
cgacctgttatcatctctagtagtaatattaaaaaaagtgcaacgcagcatcggcctctc
agagagcgcctcatacacttgctggcccttaagccatacaagaagccggagctgatccta
aggttacagaaagatgggctctcacctttagataaagactccctggacagccacctgcaa
caggtggcgaatctcagtgggagagacagcaccttcacattgaaggactttttgtttaaa
gaagttcaaaaggactggccgggctatacagaaggggaccagcagcttttgacaagaatc
ttgttcagaaagcaatgccaaacccagaacagctctgcccctccaccagagagcccaccc
aaagagctggccagcagctcgccctcgcagaaacgaccggctgctgacttcatcgatcct
ctcatcaacaaaaagcccagaatatcacacctcgccagcaaggctgcaacagccgctctt
aatggcaagttgaacgcctccaatgggagaggagagacaggtggaggacaggcagatgct
gttcctatgtctgatagtgggacgacgtccagctcccagcaccttccaatgctggacatt
ccccgtcctttcgaagcactgtcagatgtcagcaatgactccagccacaatgggagagac
tgtgaccctcaggagtcagccgtgtcggagaggctcagccaaccactttcacaattttcg
acagcgctcactacacccagcatcagcacgtcgtcttctggacactcacttctggatggc
acccgggacaaaagtctcgtgtcctgtaatagcaaatccagaaagaagtccaaaaaacat
aaagagaaggagaagagcaaagagaaggagaggaagagcaaagacaaaggcagagtacca
gaaataaatcaagaaaaggtggaggagagaaagagttgtgacgaacatgtgcctaagctt
aacaaagcctgtgagatgagcctgaaaaacctcaaaagcaacagtatttcacagaaaagc
acagatctgaatggaatgtgcaaccgtactggtatcccgtcatcagtgcctgaagtggct
gaataccttgtggtttacacagtgattgactcgccggagcagcgccagagatataaaaac
gatttcaacgcagagtacagtgaataccgcggtctccatgctcgcatagagagcattact
cggcagtttactgtgctagacaatgagttaaagcagcttcagcaaggcacagaaaagtac
aagacaatccacaatcagatacttcaagaatatcacaaaataaaaaagactaatccaaac
tataaccaagacaagaaccgctgtgaatatctgcacaaaaaactggcacatataaaaaga
cttattgcagagtacgatcaacaacaactggaaaagtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (26)   

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