KEGG   Cynoglossus semilaevis (tongue sole): 103379580
Entry
103379580         CDS       T04866                                 
Symbol
cftr
Name
(RefSeq) cystic fibrosis transmembrane conductance regulator
  KO
K05031  cystic fibrosis transmembrane conductance regulator [EC:5.6.1.6]
Organism
csem  Cynoglossus semilaevis (tongue sole)
Pathway
csem02010  ABC transporters
csem04530  Tight junction
Brite
KEGG Orthology (KO) [BR:csem00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    103379580 (cftr)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    103379580 (cftr)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:csem02000]
    103379580 (cftr)
Enzymes [BR:csem01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.6  channel-conductance-controlling ATPase
     103379580 (cftr)
Transporters [BR:csem02000]
 ABC transporters, eukaryotic type
  ABCC (CFTR/MRP) subfamily
   ABCC7 subgroup
    103379580 (cftr)
SSDB
Motif
Pfam: CFTR_R ABC_membrane ABC_tran RsgA_GTPase AAA_29 DUF87 AAA_16 AAA_21 nSTAND3 T2SSE MMR_HSR1 AAA_23 FtsK_SpoIIIE Dynamin_N MeaB Zeta_toxin NB-ARC AAA_30 Fig1 nSTAND1
Other DBs
NCBI-GeneID: 103379580
NCBI-ProteinID: XP_008309396
Position
6:complement(2282516..2306780)
AA seq 1508 aa
MQKSPVEDANFLSKFFFWWTSPLLRKGFRKKLDLSDVYKAPSFDLADNLSERLEREWDRE
VVSAKKKPRLLRALARCFFAPFAFFGVLLYLGEASKAVQPQLLGRIIASFDPFHAPERSQ
GYFLALGLCLLFTARFLLLQPAIFGLHHLGMQIRIALFSLIYKKTLKLSSRVLDKISTGQ
LVSLMSAHLNKLDESLGLAHFVWITPLQCILCVGLIWELIEVNGFCALAALTLLGIIQAW
LSQKMEPHRVKRAGMISRRLALTSEIVENIHSVKAYGWEEVMETIIKNIRQDEMTLTRKI
GSLRYFYSASYFFSAILVIVSAVVPHALSKGIILRRIFTTASYCMVLRMTLTRQLPGSIQ
MWYDTLALVKKIEEFLMKEEYRELEYNLTTTDVELVNVSASWDEGIGELFEKIKQESKAN
GHPNGDAGLFFTNLYVTPVLKNISLYLEKGKMLAVAGSTGSGKSSLLMMILGELVPSEGK
IRHSGRISFSPQTAWIMPGTIRDNILFGLTYDEFRYTSIIKACQLEEDFSLLPDKDKTLL
GEGGVILSGGQRARLGLARAVYKDADLYLLDAPFTHLDIVTEKEIFEKCICNLMASKTRI
VVTSKLDHLKRADKILLLHNGDCFFYGTFSELQAQRPDFSSLLLGLEAYDNINADRRSSI
LTETLRRVSIDETAGLWGPEPIRQSFRHPPPPVISQGPPGGDVYPEKRKQSLILNPLAAA
RKFSFIGNSQQTNAPQSAAMEDGVRELSERKFSVVPEDEQVEEVLPRSNVYHHGFQHLNG
QRRQSVLAFITNAQGQVRRDQMQSSFRRKLSITPQCDLATELDIYARRLSKDSVYDISEE
VDEEDMEQCFADERENIFDTTSWSTYLRYVTTNKSLIYVLVFIAVVFAIEVAGSVIGIFL
ITDEIWRDGANPSSPNYITEQHPNSSAPPVHLAVIVTPTSAYYIIYIYVATSESVLALGI
FRGLPLVHTLLTVSKRLHEQMLGAVLRAPMAMLNTMKTGRIMNRFTKDMTTIDDMLPLVL
FDFIQLSLIVLGAIFTVSIMRPYIFIAAIPLAVIFVVLRKYFLRTGQQLKLLEAEARSPI
FSHLIISLKGLWTIRAFGRQTYFEMLFHKALNTHTATWFHYLATLRWFLFRCDILFVLFF
SAAAFIAVGTNKDKPGEVGIIVALAMLILGTFQWAVITSITVDGLMRSVERVFKFIDLPS
EEPMRGRSGGKGGLDLVIDNPHVHDCWPNRGQMDVQGLTVKYTEAGRAVLSNVSFSVDGG
QSVGLLGRTGSGKSTLLSALLRLASTEGEISIDGVSWSSVSLHTWRKAFGVVPQKVFILT
GTFRMNLDPYGRYCDEDLWRVAEEVGLKSVIEQFPDKLDFQLLDGGSVLSNGHKQLMCLA
RSILSKARILLLGEASCVCESRTLQVLRKTLKQAFSGCTVILSEHRVEPLLECQSFLMIE
NSSMKNYDSIHKLLNETSHLKQAMSTADRLRLFPTLHRLNSSKRAAPPVTKISSLPEEAE
DEVQDTRL
NT seq 4527 nt   +upstreamnt  +downstreamnt
atgcagaagtcaccggtggaagatgctaacttcctctctaagtttttcttctggtggaca
tcaccgctgctgaggaagggcttcaggaagaagttggatctgtcagacgtgtacaaggct
ccttcctttgatctggcagacaacctctctgagagactggaaagagaatgggacagggag
gtggtgtcagccaagaagaagccccggctgctgagggcactggcccgctgcttctttgcc
ccgtttgccttcttcggtgtcctcctgtacctgggggaggcctccaaggcggtgcagccc
cagcttttgggtcgcatcatcgcttcgttcgaccccttccacgccccggagcgaagccag
ggatatttcctggctcttggtctgtgtctcctcttcactgctcgcttcctgctgctacag
cctgccatcttcggcctgcaccacctgggtatgcagatccgcatcgccctcttcagtctc
atttacaagaagaccctgaagttatccagccgcgtcttggataaaatcagcacgggtcaa
ctggtcagtctgatgtcagcccacctgaacaagctggacgagagtctgggtctggcccac
tttgtgtggatcactcccctacagtgtatactgtgcgtgggcctgatatgggagctgatc
gaggtgaacggcttctgtgccctggcggctctgactctgctgggcatcatccaggcctgg
ctctcacagaagatggagcctcacagggtgaagcgagccgggatgatcagtcgccgtctg
gctctgacgtctgagattgtggagaacatccactctgtgaaggcgtacggctgggaggag
gtgatggagaccatcatcaaaaacatcaggcaggatgagatgacgctgacgaggaagatc
ggatcgctgcgttacttctacagcgcctcctacttcttctctgccatcctggtcatcgtg
tcggccgtcgtgccccacgctctcagtaaaggcatcatcctgagacgaatcttcaccact
gcctcctactgcatggtcctgagaatgacgctgacgcggcagctgcccggctccatccag
atgtggtacgacacgctggcgctggtcaagaagatagaggagttcttaatgaaggaggaa
tacagagagctggaatacaacctcaccaccaccgacgtggagctggtcaacgtttctgcg
tcctgggatgagggcatcggtgagctgtttgagaagatcaagcaggagagcaaagcaaac
ggacatccaaacggtgacgccgggctcttcttcaccaacctttacgtcacgcccgtcctc
aaaaacatcagcctttatttggagaagggcaagatgttggcagtggctggatccaccggc
tcaggaaagagctccttactcatgatgatcctgggagagttggtgccgtcggaggggaag
atcagacacagcggccggatctcgttctcaccacagactgcgtggataatgcccggaacc
atccgtgacaacatcctgtttgggctgacctatgacgagttccgctacacttccatcatc
aaggcctgtcagctggaggaggatttttctctgctgcctgacaaagacaaaaccctgctg
ggtgaagggggcgtcatcctcagcggaggtcagcgagcccgacttggactggccagagcc
gtgtataaagacgctgacctctacctgctggacgccccgttcacacacctggacattgtg
acggagaaagagatctttgagaaatgcatttgtaatttaatggcctccaaaacccgcatc
gtggtcaccagcaagttggaccacctcaagcgagcggacaaaatccttttgctccacaac
ggtgactgcttcttctacggcaccttctcagagctgcaggcccagcgcccggacttcagc
tccctcctccttggcctggaagcctacgacaacatcaacgcggaccgtcgcagctccatt
ctcacagagactctccgcagggtttccatcgatgaaaccgccggcctctgggggccagag
cccattcgacagtcgttccgccatccgccacctcccgttatctctcaaggccctccaggt
ggcgatgtctacccagaaaaacgcaagcagtccctcatcctaaatcccctggcagctgct
cgcaagttctccttcatagggaactcccaacagacaaacgctccgcagtctgcagcgatg
gaggacggggtccgagaactttcagagagaaaattctccgtggtgccagaggacgaacaa
gtggaggaggtgctccccaggagtaacgtgtatcaccacggtttccagcacctgaatggg
cagaggcgtcagtccgtcctggccttcatcaccaacgctcaaggtcaagtgcgcagagat
cagatgcagtcgtccttcagaagaaagctgtccatcacaccgcagtgcgatctggccaca
gagctggacatttacgctcgccgtctgtccaaggacagtgtttatgacatcagtgaggag
gtggacgaagaagacatggagcaatgctttgcagatgaacgcgagaacatctttgatact
acctcatggagcacgtacctgcgctacgtcaccaccaacaaaagcctgatctacgtcctc
gtgttcatcgctgtggtctttgcaattgaggttgctggttcagtcattggcatttttctc
atcactgatgagatctggagagatggagccaatccgtcctctcccaactacatcaccgag
cagcatcccaattcctcggcgccccctgtccacttagccgtcatcgtcacgccgaccagc
gcttactacatcatctacatctacgtggccacgtcggagagcgtgctggccctcgggatt
ttcaggggtctcccgttagtgcacacgttactcactgtgtccaaacgactgcacgaacag
atgctgggcgccgtgctgcgggcgccgatggccatgttgaacacgatgaagacaggtcgc
atcatgaacagattcaccaaggacatgacgaccatcgatgacatgctgcccctggtgctc
tttgacttcatacagttgtcgttgatcgtcctgggcgccatcttcaccgtgtccatcatg
cggccgtacatctttatcgccgccatcccattggctgtcatctttgttgtcctcaggaag
tactttttacgaactgggcagcagctgaaactgctggaggcagaggcccgaagccccatc
ttctcccacctcatcatctcactgaagggtttatggaccatccgggcgtttgggcgtcaa
acctattttgaaatgctctttcacaaggccctgaacacgcacacggccacgtggttccac
tacctggccacgctgcggtggttcctgttccgctgcgacatcctcttcgtcctgttcttc
agtgcggccgccttcatcgccgtgggaaccaacaaggacaaaccaggggaggtcggcatc
atcgtggccctggccatgctcatcctggggactttccaatgggccgtcatcaccagcatc
actgtagatggactgatgcgttcggtggaacgggtcttcaaattcatagacctgccctca
gaggagccgatgcggggtagatcagggggcaaaggaggccttgacctggtcatcgacaac
cctcacgtccatgactgctggcccaaccgtggacagatggacgtccagggtctgactgtc
aaatacacggaggctggacgggctgttctcagcaacgtttccttctctgtggacgggggg
cagagtgtgggtctgctgggtcgaacgggttcagggaagagcacgctgctctccgctctg
ctgcgtctggcctccactgagggcgagatctccatcgacggcgtctcctggagctcagtg
tccctgcacacctggaggaaagccttcggtgtggttccacagaaagtctttattctgacc
ggaaccttccgcatgaacctggatccatacggtcgatactgtgatgaggatctgtggagg
gtggcggaggaggtgggtctgaagtcggtgattgaacagttcccagacaaactggacttt
cagctgctggacggaggcagcgtcctgagcaacggacacaaacagctgatgtgtctggcc
cgctccatcctcagcaaggcccgcatcctgctgctgggagaggcctcgtgtgtgtgtgag
agcagaacattgcaggttctgaggaagacgctgaagcaggccttctccggctgtactgtc
atcctctcagagcacagagtggaaccactgctggagtgtcagtcgttcctgatgatcgag
aacagctccatgaagaactacgactccatccacaaactcctgaacgagaccagtcacctg
aagcaagccatgagtaccgcagacaggctccgcctcttccccacactgcaccgcctcaac
tccagcaagagggcggcgccaccggtaaccaaaatctcatcactgccagaggaagcggag
gatgaagtccaggacactcgactctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (20)   
   Pfam (20)   
All databases (50)   

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