KEGG   Cynoglossus semilaevis (tongue sole): 103387824
Entry
103387824         CDS       T04866                                 
Symbol
atg12
Name
(RefSeq) ubiquitin-like protein ATG12
  KO
K08336  ubiquitin-like protein ATG12
Organism
csem  Cynoglossus semilaevis (tongue sole)
Pathway
csem04068  FoxO signaling pathway
csem04136  Autophagy - other
csem04140  Autophagy - animal
csem04621  NOD-like receptor signaling pathway
csem04622  RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:csem00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04068 FoxO signaling pathway
    103387824 (atg12)
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    103387824 (atg12)
   04136 Autophagy - other
    103387824 (atg12)
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    103387824 (atg12)
   04622 RIG-I-like receptor signaling pathway
    103387824 (atg12)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:csem04131]
    103387824 (atg12)
   04121 Ubiquitin system [BR:csem04121]
    103387824 (atg12)
   03029 Mitochondrial biogenesis [BR:csem03029]
    103387824 (atg12)
Membrane trafficking [BR:csem04131]
 Autophagy
  Autophagosome formation proteins
   Atg12 conjugation proteins
    103387824 (atg12)
Ubiquitin system [BR:csem04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitin-like proteins (UBLs)
   103387824 (atg12)
Mitochondrial biogenesis [BR:csem03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    103387824 (atg12)
SSDB
Motif
Pfam: APG12 ATG8 DUF3201
Other DBs
NCBI-GeneID: 103387824
NCBI-ProteinID: XP_008320831
Position
13:107129..109965
AA seq 117 aa
MSDSAESPTEPQKEDSRPTTDDSAANDEKKKIDVLLKAVGDTPIMKTKKWAVDRGRTVQS
LSQFISRFLKLDANEQLFIYVNQAFAPSPDQEVGALFDCFGSDGKLVLHYCKSQAWG
NT seq 354 nt   +upstreamnt  +downstreamnt
atgtctgacagcgccgagtctccaacggaaccacagaaagaagattctcggcccacgaca
gacgattcggcggcgaatgacgagaagaaaaaaatcgacgtgctgttgaaggcagtggga
gacactcctataatgaagacaaagaagtgggcagtggaccggggcaggacggttcagtct
ctgtctcagttcatttctcgtttcctcaaacttgatgccaatgaacagctgttcatctac
gttaaccaggctttcgcaccttcacctgatcaagaagtcggggccctatttgattgtttt
ggcagtgatggaaagttggtccttcattactgtaaatcccaggcctggggttga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (5)   
   KEGG PATHWAY (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   RefGene (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (20)   

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