KEGG   Cynoglossus semilaevis (tongue sole): 103389401
Entry
103389401         CDS       T04866                                 
Symbol
pus1
Name
(RefSeq) tRNA pseudouridine synthase A, mitochondrial isoform X1
  KO
K06173  tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
Organism
csem  Cynoglossus semilaevis (tongue sole)
Brite
KEGG Orthology (KO) [BR:csem00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:csem03016]
    103389401 (pus1)
Enzymes [BR:csem01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.12  tRNA pseudouridine38-40 synthase
     103389401 (pus1)
Transfer RNA biogenesis [BR:csem03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    103389401 (pus1)
 Prokaryotic type
    103389401 (pus1)
SSDB
Motif
Pfam: PseudoU_synth_1 DUF2344
Other DBs
NCBI-GeneID: 103389401
NCBI-ProteinID: XP_008323013
UniProt: A0A3P8UXX0
Position
14:6746650..6749284
AA seq 420 aa
MLKFRPLSSALLNHKLKSRISGYLFKLRCTMSEASNDVPEAKQMKRGHEENEDSTERLQN
IKRIKAQEDNAENEKKYPKKKVVLLMAYSGKGYYGMQRNVGTSEFRTIEDELVAALVKSG
CIPENHGDEMKKMSFQRCARTDKGVSAAGQVVSLKLRLMDNVIENINEHLPPQIKVIGLK
RVTQGFNAKNNCDARTYSYMLPTVAFAPKDYDTASASAFRLDPETLPKVNRLFSTYKGTH
NFHNFTSQKAPSDPSARRYIMEMSCGEPFVRGGSEFAVITVRGQSFMLHQIRKMIGLVIA
IMKGYVNEDVIERSWGEEKVDVPKAPGLGLVLERVHFDRYNKRFGGDGLHECLEWDEDEE
GIKAFKEAYIYPTIVETECQEGSMVSWMSTLPIHDFQNTINGNRDEDQTQDNADDGNETD
NT seq 1263 nt   +upstreamnt  +downstreamnt
atgttaaaattcagaccactgtcgagtgccttattgaaccataaactgaagtcaagaatc
agcggttacctatttaaactcaggtgcacgatgagtgaagcgtcaaatgatgtgccagag
gccaaacagatgaaaagaggccatgaagagaatgaagattctacagagaggctgcagaat
ataaaaagaattaaagctcaggaggataacgctgagaatgagaagaagtatccaaaaaag
aaagtagtcctcctcatggcatattcaggaaaaggatactacggcatgcagagaaatgtt
ggaacctctgagtttaggaccattgaagatgagctggtcgctgcactagtgaaatccggc
tgcattcctgagaatcacggcgatgaaatgaagaagatgtctttccagaggtgtgcaaga
acagataagggagtgtctgctgccggccaggtggtgtcgctaaagctacggttgatggat
aacgtaattgagaacatcaatgagcatctgcccccacagattaaagtgattggtctcaaa
cgggtcacccagggttttaacgccaaaaacaactgtgacgctcgcacctactcatacatg
cttccaacagtagcctttgccccaaaagactacgacacagcaagtgcatcagccttccgc
ttggatccggagacacttccgaaggtgaaccgtctgttcagcacgtacaaaggcacccac
aacttccacaacttcacttctcagaaggccccaagtgaccccagtgctcgtcgctacatc
atggagatgtcctgtggagagccgttcgtccgaggcggctcggagtttgcggtgatcact
gtgcgaggccagagcttcatgctgcaccaaatacggaagatgattggcctggtgattgca
atcatgaagggatatgtgaacgaggatgtgatcgagaggagctggggagaggagaaggtg
gatgtgccaaaagctccgggattaggacttgtcctggaaagagtccactttgaccggtac
aacaagcgctttggaggagatgggctgcatgaatgcttggagtgggacgaggatgaagag
ggaatcaaagcatttaaagaggcttacatctacccaaccattgtggagacagagtgccag
gaaggctccatggtcagctggatgtccacgcttcctatccatgactttcagaacacaatt
aatggaaatcgagatgaggaccagacacaggacaacgcagacgacgggaatgagacagac
tag

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (2)   
   Pfam (2)   
All databases (30)   

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