KEGG   Cynoglossus semilaevis (tongue sole): 103390103
Entry
103390103         CDS       T04866                                 
Symbol
nup188
Name
(RefSeq) nucleoporin NUP188 homolog
  KO
K14311  nuclear pore complex protein Nup188
Organism
csem  Cynoglossus semilaevis (tongue sole)
Pathway
csem03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:csem00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    103390103 (nup188)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csem03019]
    103390103 (nup188)
Messenger RNA biogenesis [BR:csem03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     103390103 (nup188)
SSDB
Motif
Pfam: Nup188_N-subdom_III Nup188_N Nup188_SH3-like
Other DBs
NCBI-GeneID: 103390103
NCBI-ProteinID: XP_016893800
Position
14:21202886..21215494
AA seq 1724 aa
MAESEMNVRSCRELWTILLGRSALREPAQIEAELDRHCDRLHQGLSYYKLPSSSSAGKVK
DNKDVAQPLKDFGLRISKLLGLDEQQSVQLLQCYLQEDYRGTRDSLKVVFKDERQSQSLL
LKIADYYYEERTCLLRCVLHLLTYFQDERHPYRAEYCDCINKLEKDLVNNFKTQFENLFK
AEAPTWETHGNLMTERQVSRWFMQCLREQSLLLEIIFLYYAYFEMSPSDLLSFTKMFKEQ
GFGLRQTNRHLVDNSMDALVERIGYLSCLILVEGMDIDFLHKCALEDCTEQHQFSSAPDI
VKEMGQLLLTFGDINHHGPVLLAWVLLRHTLRPDESSPVIRRIGHTALQLEVFKYLSAML
KSLGVSGNNCTASTAKMCIYGLLSFMMTSFEEESLQHTHLIDAACEVLSAPNLAEVFWDM
KPNMGLGMILDSAAGMFPHKIGPLLQLLTALVSNKLTVKKVYNFLDKMSFYTQVYKHKPN
DIISKDDETLWRRQTPKLLYPLGSGQTNLWMPQGVLGQVMIGSDGYIIRWDHSYNVVSTA
DVLVHCARVKPILDLVHKIISIDWTVSDCLLPLTSRIYMLLQRLTSVIDPPVEVIASCVN
CLAVLAARMPGKVWSSLHHTGFLPFASNPLTSMAQCLSAEGMKAGNYGNLLVQSEQPKGE
YAVTIAFLRLITTLIKGQLGSTQNKGLIPCVLLVLKEMLPTYHKWRYNTYGVRERIGCLI
FELIHAILNLSPDGEDQTSSPTLQSLCIYSLANTEAGQAVVNIMGVGVDTIDMVLAAQPS
SCSSEDPGQILIQTVKLAFSVTNNVIRLKPPSDLVSPLEQALTQHSGHGTNLIIVLAKYI
YHKHDPALPRLAIQLLKRLATAAPMSVYACLGSDAAAIRDAFLTRLQSKTEDMRIKVMIL
EFLTVAVETQPGLIELFLNLEVKDGNEGSKEFLLGEWSCLHVVLDLIDSKQQGKYWCPPL
LHRAALAFLLALWQDRRDSAISVLRAKERFWENLTTPLFGTLTPPSDTTEPCVLETCAFV
MEIIGLEIYYVVSGSLAQSLKDGLQKFSNARRYEYWSQYVKSLVCHVAEMDEESMCQFKE
TQMLISAWRMLLILSTSHSDVMQLKDDATKLKLFMDVLEGTKAALMTPMSMTCLRLGSMI
TTLLLILLKQWRCVLATAPDILSPLSLILESVLKADQELMERTKAKIFSALISVLQIQGL
NGGDISHLPQLLLSVCETVKDESLMLIDNMRYVSQTEDRAEDEDCMETDSPRGAHKDQRD
GVCVLALHLAKELCRTDEDGEHWYSVMRKVPVLPSVLSAVELSLRSKHNLYFTEAALHLL
LTLARTPQGAAAVAGAGVIQTICLPLLSVYEVSSSESSQSFSRKSQDSACWPGVYRLCMS
LMESLLKTLRYNFINEALDFVGVHQERILQCLNAVRTVQSLTCLDEADHTVGFLLQLSSF
VKEWQFHLPKLLHDVQVNLCYLCQACTYLLHSKKMLNHYLQAKNGEALPPAPLPKAQRPP
QTPSKEAAGAGEREETEQKALLAVQCSLLKILSKTLATLQHFTPDCCQILLDQCMDLAEY
RTLFVLSFTTPAFDPDVAPSFGTLLATINVALSMLTEIEKKKEPVSVSIVSLASTEEIQA
LKSLLMFTMENCFYVLISQAVRCLKDPSIMHRDKQRLKQELSSELSTLLSSLSRHFRRGS
PSSPASGLLPSTQSKPPTPGSKASPEGQEPFIQLVQAFVRLVQR
NT seq 5175 nt   +upstreamnt  +downstreamnt
atggcggaatcagagatgaacgttaggagttgtagggaattatggactatactgctcgga
agatctgctttaagagaaccggcgcagatcgaggcagaacttgacagacattgtgacaga
ctccatcaaggactcagctactataagctacccagttcatcttctgctgggaaagtgaag
gacaacaaagatgttgctcagccactaaaggattttggtttgaggatcagtaaattgttg
ggtcttgatgagcagcagagtgtgcagcttttacagtgctacctgcaagaagattacaga
ggaacacgtgattcgttaaaggttgttttcaaagatgaacgacaaagccagtcattgcta
ttaaagattgctgattattattatgaggagcgaacatgtcttctcagatgtgtccttcat
ttgctgacatactttcaagatgaacgacatccttacagggctgagtactgcgactgtatc
aataaacttgaaaaagacctggtaaacaatttcaaaacacagtttgaaaacctcttcaaa
gcagaagcaccaacatgggaaacccatgggaacctcatgacagaaagacaggtgtcacgt
tggttcatgcagtgtctgagagaacaatctctgcttctggagatcatctttctttactat
gcctactttgagatgagcccgtctgaccttctcagcttcacaaagatgttcaaggagcaa
ggctttggtttgcgacagaccaacagacaccttgttgacaacagtatggatgcattggtt
gagcgtattggatatttgagctgtctcatccttgttgagggtatggatattgacttcctg
cacaagtgtgcactggaagactgcacagagcagcaccagttctccagtgctccagatatt
gtcaaggagatgggtcaactgctgctgacctttggtgacatcaatcatcacgggccggtg
ctgctggcctgggtactgctgagacacacactgagaccagacgagtccagcccggtcatc
aggaggataggtcacactgctctgcagcttgaggtgtttaaatacctctcggccatgctg
aaaagccttggagtctcagggaacaattgtacagcaagtacagccaagatgtgcatctac
ggactcctctcattcatgatgacatcttttgaagaagaaagtttacagcacacacacctg
attgatgctgcctgtgaagttctctctgcccccaatctggccgaggtcttttgggacatg
aagccaaacatgggactaggaatgatcctggacagtgcagctggaatgttccctcataag
attggaccactgttgcagcttcttactgcacttgtgtcaaacaagttgactgtcaaaaag
gtttacaactttttagataagatgtctttttatactcaagtttacaaacataagccaaat
gacatcatttcaaaagatgatgagacattatggagaagacaaacacccaaacttctttac
cctcttgggtctggacagactaacctttggatgccacagggggtgttgggtcaggtgatg
attgggagtgatggttatataatccgctgggatcactcctacaatgttgtttccactgca
gatgttcttgttcactgtgctcgtgtgaagcccatccttgatttggtgcataagatcata
agcatagactggactgtctcagactgtctgctgccactcacctcacgcatctatatgctg
cttcagaggttaacgtctgtcatcgaccctccagtagaagttattgcctcctgtgtgaac
tgcctcgccgttctggccgcaaggatgcctggaaaagtgtggtccagtctgcaccacaca
ggttttcttccatttgcatctaaccctctgaccagcatggctcagtgtctgagtgctgaa
gggatgaaggcaggtaattacggcaacctgttggtccagagcgaacagccgaagggggag
tacgctgtgaccattgcctttcttcgtctcattacaaccctgatcaagggtcaacttggc
agtactcaaaacaaaggtctgatcccatgtgttctgctggtgctaaaggagatgctgcct
acgtaccacaagtggcgttataacacgtatggagttagagagaggataggttgtctcatt
tttgaactgatccatgccatcctgaatctcagccctgacggtgaagatcagaccagctct
cccactctgcagtctctctgcatctacagcctggccaacactgaggcagggcaggcagtg
gtcaacatcatgggagttggagtggacaccatagatatggtcctggctgcacagcccagc
agctgtagttctgaggatccaggtcagattctaatccagactgtcaagctggccttctcc
gtcacaaacaatgtcatccgtctgaagccaccctctgaccttgtttcacctctggagcag
gcactgacacagcacagtggtcatggcacaaaccttataattgttctggccaagtatatt
taccacaaacatgacccagctctgcctcgcctcgccatccagctgcttaaaagactcgcc
acagcagctcccatgtcggtctatgcctgcctgggcagtgacgcggcagccatcagggac
gcttttctcactcggctgcagagcaaaacagaagacatgagaatcaaagtcatgattctt
gagtttcttactgttgcagtagaaacccagcctggtctgatcgagctattcctcaacctg
gaagtcaaagacgggaacgaaggctcaaaggagtttcttcttggtgagtggagctgttta
catgtggttttggacctaattgactccaaacagcagggaaagtactggtgtcctccactc
ctccaccgtgctgctctggcctttttgctggccctctggcaggatcgcagagatagcgcc
atctctgtgttacgtgcaaaagaacgattttgggagaacttgacaacgcctttgtttgga
actctcactccgccttcagacaccacagagccttgtgttctggagacctgtgcttttgtc
atggaaatcattggtctagaaatctactatgttgtcagtggttctttagcgcagtccctg
aaggatgggctgcagaagttctccaatgctcgacgttatgagtactggtcccagtatgtg
aagtctctggtgtgccacgtggcagagatggacgaagagagtatgtgtcagttcaaagag
acacagatgttgatctctgcctggaggatgttgctgattctttccaccagtcactctgat
gtgatgcagctcaaagatgatgccaccaagctgaagcttttcatggatgtgttggaggga
actaaagcagctctgatgacacctatgtctatgacttgtctccgccttggatccatgata
accacgttactgctcatcctgctcaaacagtggagatgtgtgttggccacagctcctgac
atcctgtctcctctctcccttatcctggagagtgtcctcaaagctgaccaagaattgatg
gagagaacaaaggccaaaatcttttctgcactcatttctgtgttgcagattcagggactg
aatggtggagatatttcccatctgcctcagctgttgctgtctgtgtgtgaaacggtcaag
gacgagtctctgatgttgattgacaacatgcgctacgtaagtcaaacagaagacagagca
gaggacgaggactgcatggagacggactctcctcgtggagcacataaggaccagagagat
ggagtgtgtgtgcttgctctgcacttagccaaggagctgtgtcgcacagacgaagacgga
gaacactggtactcagtgatgaggaaggttccggttcttccttcggtgctcagtgctgtg
gagctcagcctgcgctccaaacacaacctctatttcactgaggctgcacttcacctgctg
ctcacactggcccgaactccacagggagctgcagctgttgcaggagcaggagtgatccaa
actatctgcctccctctgctcagtgtctatgaagtttcttccagtgaatcgtcacagagc
ttttctcgtaagtcccaggactcggcctgctggcccggggtttaccgactctgcatgtcg
ctgatggaaagtctgctcaagaccctgcgctacaacttcatcaatgaggctctggacttt
gttggagtccatcaagaacgcatcctgcagtgtctgaacgcagtgcgaaccgtgcagagc
ctgacgtgtttagacgaggccgaccacacggtgggcttcctgctgcagctctccagcttc
gttaaggagtggcagtttcacctcccaaagctgctccatgacgtacaggtcaacctgtgt
tacctttgtcaggcctgcacctatctgctccacagcaagaagatgctcaatcactacctc
caggctaaaaacggtgaagctctgccccctgctcctcttcccaaggctcagcgacctcca
cagactccatccaaggaggcggcgggtgcaggagaaagagaggagaccgagcagaaggct
ctgctggccgttcagtgcagcctgctgaagatcctcagcaaaaccctggccacgctgcag
cacttcaccccagactgctgtcagattctcctggaccagtgcatggacctggcagagtac
agaaccctgtttgtcctcagcttcactactccggccttcgaccctgacgtggcgccttcc
tttggaactctgctggccaccatcaacgtggccctcagcatgttgacagagatagagaag
aaaaaggagccagtttctgtgagcattgtgtctctggcttccactgaggagatccaggct
ctgaagtcgttgctgatgttcaccatggagaactgtttctacgtcctcatctctcaggca
gtccgttgtctcaaagacccctcaatcatgcaccgggacaaacagagactgaaacaggag
ctgagctctgaactgagcactcttctgtccagcctgtcccgtcacttccgtagaggctca
ccatcctctccagccagtggcctcctgccctccacccagtccaaacctccaactccaggc
tccaaagccagtcctgaaggtcaggagccgttcatccagctggtgcaggcgtttgtcaga
cttgtacagagatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (31)   
   KEGG ORTHOLOGY (1)   
   RefGene (27)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (40)   

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