KEGG   Cynoglossus semilaevis (tongue sole): 103390176
Entry
103390176         CDS       T04866                                 
Symbol
ddx54
Name
(RefSeq) ATP-dependent RNA helicase DDX54
  KO
K14808  ATP-dependent RNA helicase DDX54/DBP10 [EC:5.6.2.7]
Organism
csem  Cynoglossus semilaevis (tongue sole)
Brite
KEGG Orthology (KO) [BR:csem00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:csem03009]
    103390176 (ddx54)
Enzymes [BR:csem01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     103390176 (ddx54)
Ribosome biogenesis [BR:csem03009]
 Eukaryotic type
  Pre-60S particles
   Helicases
    103390176 (ddx54)
SSDB
Motif
Pfam: DEAD Helicase_C DBP10CT CMS1
Other DBs
NCBI-GeneID: 103390176
NCBI-ProteinID: XP_008324140
UniProt: A0A3P8WH51
Position
14:complement(22420546..22430707)
AA seq 861 aa
MAQRKKKFTKKKRHSANREYEADSDSGEFEVAAEIKDDDSACKKLPQFPAASDCLSDVEP
DTRKLVRAQNKKKKKSGGFQSMGLSFPVYKGVMKKGYNVPTPIQRKTIPVILDGKDIVAM
ARTGSGKTAAFLVPMFEKLKAPQAQTGARALILTPTRELALQTMRFTKELGRFTGLKTAL
ILGGDRMEDQFAALHENPDIIIGTPGRLMHVVQEMNLKLQNVEYVVFDEADRLFEMGFAE
QLQEIIRRLPDSRQTLLFSATLPKLLVEFARAGLTEPVLIRLDVDSKLSDLIKLSFFHLR
VDNKPAMLLHLLRNVVKPQEQTVVFAATKHHVEYLKELISSEGLECAYIYSALDQTARKI
NIGKFVHRKAMVLIVTDVAARGIDIPLLDNVINYNFPSKPKLFLHRVGRVGRAGRSGVTY
SLVCPDEMALVYDLHLFLGRPVQFATPEHTRDSDGVFGRVPQSVLDDEGSHLVTLHENSL
DLLNLQRVSENAYKQYLKSRPNPSPESIRRVKNTDLSTMAVHPLLGSALDQVELQHLQIV
DAIKGYKAKSTIFEINSTSKTQASEVMRTKRSKDARSVDKFNKHREDVAAESRLHEPVKP
NADDDFSHTVGSEEGALNGVFSAVVGVKRSGPHEGAEQQRNKRSRERGKDEEYYIPYRPK
DFDSERGLSLGGEGTAFDQQASTAVLDMMGDEGDHFTKHKSLMKWDRKRKRFVKDTGKED
QKKKMRIDGGQVIGVKKNKKNFYEEWKKKYKVDDGDAGADHEAGGGGGRRRPGRGRGHGH
RGPNTQSSAGAQRTPGGRIVRSELKSSKQILTQRKKQQKQQFLQGGGMKKLRSKNRRWVG
EVKKSGFGRGGQKKGKMKKRL
NT seq 2586 nt   +upstreamnt  +downstreamnt
atggcccagagaaagaagaagtttacaaagaagaagagacattcggcgaacagagagtat
gaggcggactctgacagcggagagttcgaggttgctgccgaaatcaaagacgatgattct
gcttgtaagaagctgccgcagttccctgccgcgtcagactgtctgtccgatgtggagccg
gacaccaggaaactggtcagagcccagaacaagaagaagaagaagtctggaggtttccag
tccatgggtctcagttttcctgtttacaaaggagtcatgaaaaaaggttacaacgttccc
actcccatccaaagaaaaaccattccagtcattttagatgggaaggacatagtggccatg
gcccgcacgggcagcggtaagacggccgccttcttggttcccatgtttgagaagctgaag
gcccctcaagcccaaacaggagccagggccctcatcttgacccccacaagagagttggcc
ttacagaccatgaggttcacaaaagagttgggaaggttcacgggcctcaagactgcactg
atcctgggcggagacagaatggaagaccagtttgctgctctgcatgaaaacccagacata
atcatcggaacgcccggtcgtctgatgcacgtcgtgcaggagatgaacttgaagctgcaa
aatgtggagtacgtggtgtttgacgaggctgacaggctttttgaaatgggtttcgctgaa
cagcttcaggaaatcatccgcagactcccagacagcagacagacgctgctgttctcggcc
acgctgcccaagttactggtggagttcgcccgagccggtctgactgaaccggtgctgatc
cgtttggatgtggattctaaactcagtgacctaattaagttgtcgtttttccacctgcgt
gtggacaacaagccggcgatgctgctgcacctcctgaggaacgtggtgaagcctcaggag
cagacggtggtgtttgcagccaccaaacatcacgtagaatacctgaaggagctgatctcc
tcagagggcctggagtgtgcctacatctacagcgccctggaccagaccgccaggaagatc
aacatcgggaagttcgtgcatcggaaagccatggtgctgattgtgactgacgtggcagcc
cgtggtatagacatccccctgctggacaatgtcatcaactacaacttcccatccaagccc
aagctgttcctgcacagagttggtcgtgtgggacgtgccggtcgcagtggcgtcacctac
agtttggtttgtccagacgagatggcacttgtttatgaccttcacctcttccttggaaga
cccgttcagttcgctacgccagaacacacaagagattccgacggcgtgtttggccgcgtc
cctcagagcgtcctggacgacgaaggctctcatctcgtcacgttgcacgagaactccctg
gacctgcttaacctccaacgggtgtcggaaaacgcctacaaacagtacctgaagtccaga
cccaacccttctccagagtccatcagacgggtcaagaacacagacctgtccaccatggct
gttcatcccttattagggtcggctttagatcaggtggaactgcagcaccttcaaatagtc
gacgccatcaagggctacaaagccaaatcgactatctttgaaatcaactccaccagtaag
acccaggccagcgaggtgatgcgaaccaaacgctccaaggacgcgcggtccgtggacaaa
ttcaacaaacaccgagaggacgtggctgcagagagtcgacttcacgagcctgtgaaacca
aacgcagatgatgacttttcacacaccgtgggctctgaagagggcgctctaaacggggtg
ttttcagctgtggttggtgtgaaacgcagcggacctcatgaaggtgcagaacagcaaagg
aacaagaggagcagagagaggggtaaagacgaggagtactacatcccctacagacccaaa
gacttcgactcagagagaggtttgagtctgggtggagagggcactgcttttgaccagcag
gcgtccacggccgtcctggacatgatgggagacgaaggcgatcacttcaccaaacacaag
agtctgatgaaatgggacagaaagaggaaacgctttgtgaaagacacgggaaaggaagac
cagaaaaagaagatgagaatagacggaggacaagtcatcggcgtcaagaagaacaaaaag
aacttctacgaggagtggaagaaaaagtacaaggtggatgatggagacgcaggcgccgac
cacgaagcaggaggaggaggagggaggaggagacctgggagaggtcggggccacggtcac
cgcggtccaaacacccagagctctgctggagctcagcgtacgcccgggggccggatagtg
cgctcagagctgaagtccagcaaacagatcctgacgcagcgtaagaagcagcagaagcag
cagttcctgcagggcggagggatgaagaagctgcggtccaagaaccgacggtgggtggga
gaggtcaagaagtcgggcttcggacgaggaggacagaagaaaggcaaaatgaagaagagg
ctgtga

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Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (4)   
   Pfam (4)   
All databases (29)   

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