KEGG   Cynoglossus semilaevis (tongue sole): 103390456
Entry
103390456         CDS       T04866                                 
Name
(RefSeq) lysine-specific demethylase 2B isoform X2
  KO
K10276  F-box and leucine-rich repeat protein 10/11 [EC:1.14.11.27]
Organism
csem  Cynoglossus semilaevis (tongue sole)
Pathway
csem03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:csem00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    103390456
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:csem03000]
    103390456
   04121 Ubiquitin system [BR:csem04121]
    103390456
   03036 Chromosome and associated proteins [BR:csem03036]
    103390456
Enzymes [BR:csem01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.27  [histone H3]-dimethyl-L-lysine36 demethylase
     103390456
Transcription factors [BR:csem03000]
 Eukaryotic type
  Zinc finger
   CXXC CpG-binding proteins
    103390456
Ubiquitin system [BR:csem04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   SCF complex
    Target recognizing subunit (F-box)
     103390456
Chromosome and associated proteins [BR:csem03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    103390456
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     103390456
SSDB
Motif
Pfam: PHD_4 zf-CXXC JHD F-box-like F-box JmjC Cupin_8 LRR_4 Rubredoxin
Other DBs
NCBI-GeneID: 103390456
NCBI-ProteinID: XP_008324543
Position
14:28315641..28340581
AA seq 1377 aa
MAAAAAAAAAAAESGRRLRSICRRMYDENDDLSDVEEITSIRGFSVEEKLLSDAYDVNFV
QVMEGKDFTYDYVQREGLRVPLIFKEADGLGIRMPDPDFTVSEIKGLVGSRRSVDVMDVS
TQKGSEMSMAXXXXXXXXXXXRDKLFNVISLEFSHTKLENLIFRPTVVDQVDWVDNMWPP
DLKQSQTETTNVISEMKYPKVQRYCLMSVKGCYTDFHIDFGGTSVWYHVFKGQKVFWLVP
PTIHNLALYEDWVLSGKQSDIFLGDRADGCQRVELQQGYTFFIPSGWIHAVYTPVDTLVF
GGNILHSFNIPMQLTIYEIENRTKVHSKFRFPFYYDMCWYVLERYLHCLTRRSYLSLDFR
KEFVATDYETKVNTVSPFSDSRSHDVNEDSCETQAREDHRDRPERLSQDSPCSPDQQHLD
SEDSCNPGSTPLQSLKSPCDSPTSESHNRWTHLTQFELRGLRTLVDKLESLPENKKCVPL
GIENPQSLLEHMKVFLKEHADDDPRMAITGVPVVFWPKKTLKPRPPNRPKPKMAASPASA
VKLSSSRGTSGARRRRTRCRKCEACLRTECGECHFCKDMKKFGGPGRMKQSCIMRQCIAP
VLPHTAVCLVCGEAGKEDTVEDEEEKFNLMLMECSICNEIVHPNCLKVKDSTGVVNDELP
NCWECPKCNHAGKTGKQKRGPGFKYASNLPGSLLKEPRLSRDVKEEPDLPVVAAVTVTAA
VKKKAERDIEIPRRKEDELPKKRPLLLAVDGTPRPRLEDNPLRKKRKLFDTNDEPVVVKK
KKKPPKPEDPMALKLLRQIHTDLDEDDQDDHEDDGLFLDRVHFREKFHYNDNEEQQDDDV
QRDEDKPTKDRDLCVDVKSRVMLSPLHRSSVGRDADQPVSNSPRAGPSSESEDAPERSSA
HLKARHQRRRPPNKELSKEFKLENPPTEDCSGKQNHGSLRTEESPANHNRRPLKNEDSVS
NQNCKPLKTDESATNQSRRTVKMEDCLESQNRRNLKLEDGPTNENHKPVKTERENEADDD
MNKWPLTNGRSDLSDWLRHRGQVLNGAARDYSPLGWNRSAHITPIRPFPCRSPPKCIQME
RHVIRPPPIIPAPDRLLLNDEECHAMRREMWMKVFSFLSHRDLCVCMRVCRTWNRWCCDK
KLWMEINLSRCKSITPLMLSGIIRRQAASLDLGWTNISKKQLSWLIHRLPGLRVLLLSGC
SWAAVSALCTSSCPLLRTLDVQWVEGVKDAQMRDLLSPPTDNRPGQMDNRSKLRHVEDLR
LSGLDITDTSLRLIIHYMPSLSKLNLSYCNHVTDQSVNILTAAGTTTRDSLTEVTLSACN
RVTDQSLTFFKRCGNICLIDLRYCKQVTKEGCDQFVAEMSVSVQFELKEDKLLQKIS
NT seq 4134 nt   +upstreamnt  +downstreamnt
atggccgccgccgccgccgcagctgccgccgctgcagagtccggacgcaggctgcgctcc
atctgccgaaggatgtacgatgaaaacgacgacctctctgatgtggaggagattacgagc
atccgaggcttcagtgtggaggagaagctgctcagtgacgcctacgacgtcaactttgtg
caggtgatggaggggaaagacttcacgtatgactacgtccaaagggaggggcttcgggtt
ccactgatttttaaggaggccgacggactggggatcagaatgcctgatccagattttacc
gtcagtgaaattaaaggtttagtcggcagccgtcggtctgtggacgttatggacgtcagc
actcagaaaggctcggaaatgagcatggctcnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nagcgggacaaactcttcaacgtcatcagcctggaattcagtcacaccaaactggagaac
ctcatctttcgaccaacagtggtggaccaggtggactgggtggacaacatgtggcccccg
gatctgaaacaaagccaaacagaaacgaccaatgtcatctcggagatgaagtaccccaaa
gtacagaggtactgcctgatgagcgtgaagggctgctacaccgacttccacatcgacttt
ggaggaacgtcagtctggtaccacgtgttcaagggtcagaaggtgttctggctggtcccg
cccaccatccataacctggccctgtacgaggactgggtcctgtctggaaagcagagcgac
atcttcctgggcgaccgagccgacgggtgtcagcgagtggagctgcagcagggctacacc
ttcttcatcccatctggctggatccacgccgtctacacccccgtggacacgctggtgttt
ggaggcaacattctgcacagcttcaacatccccatgcagctcaccatttatgagatagag
aacaggacgaaggttcactccaagttccgcttcccgttctactacgacatgtgttggtac
gtcctggagcggtaccttcactgcctcaccagacgatcctacctgtcgctggacttcaga
aaagagtttgtagccactgactacgagaccaaggtcaacacagtcagtcctttctccgat
tcgaggagccatgacgtgaacgaggactcgtgtgagactcaggcgagagaagaccaccgt
gaccgaccggagcgtctctcccaggacagtccctgttcccccgaccaacagcacctggac
tctgaggacagctgtaatcccggctccactccgctgcagtccctcaaatccccctgtgac
tccccgacctcggagtctcacaacaggtggactcatctgacacagtttgagctgcgggga
ctgaggacgctggtggacaagctggagtccctccccgagaacaagaaatgtgtccccctg
ggaatcgagaacccgcaatccctgctggagcacatgaaggtgttcttgaaggaacacgct
gacgacgaccccaggatggccatcactggagtccctgtggttttttggccaaagaaaact
ctaaaaccgcggcctcccaatcggccgaaacctaagatggcagcgtctcctgcgtcagca
gtcaagctgtcatccagtcggggaacatctggtgccaggaggagaagaacccgctgccgc
aagtgcgaggcgtgcctgcggacggagtgcggcgagtgccacttctgcaaggacatgaag
aagttcggtgggccgggtcggatgaagcagtcgtgcatcatgaggcagtgcatcgcgccc
gtgctccctcacactgcagtgtgtctggtctgtggagaggccgggaaggaggacactgtg
gaggatgaggaggagaagttcaacctgatgctgatggagtgctccatctgcaacgagatc
gtccatcccaactgtctcaaagtcaaagattcgactggagtggtcaacgacgaacttcca
aactgctgggagtgtccgaagtgcaaccacgccggcaaaacagggaaacaaaaaagaggc
ccaggtttcaaatacgcctcgaacctccccggctcgctgctcaaggagcccaggctgagt
cgggacgtgaaggaggagcccgacctgcctgtggtggccgcggtcaccgtgaccgcagcc
gtgaagaagaaggcggagcgggacatagaaatacccaggaggaaggaggacgagctgccg
aagaaacggcccctcctgctggcagtggacggaacgccgcggcccaggctggaggacaac
ccactgaggaagaagaggaaactttttgacaccaatgacgaacctgtggtcgtgaagaag
aagaagaaacctccgaaaccagaagatccgatggctctgaagctgctgcgacaaatccac
acggacctggacgaagacgaccaggacgaccacgaggacgatggacttttcttggacagg
gttcatttcagggagaaattccactacaacgacaacgaggagcaacaggacgatgacgtg
cagcgagacgaggacaaacccacgaaggaccgagacctgtgcgtggacgtgaagtccagg
gtcatgttgagtccactgcacaggtcctcagtgggcagggacgctgaccagcccgtgtcc
aactctcccagagccggacccagcagcgaatcagaggacgcgccggagagaagctccgcc
catctcaaggcgcgtcatcagcggcgccgcccccccaacaaagaactgagcaaagagttc
aaactggagaaccctccgacggaggattgttccggaaaacagaaccacggctcgctgaga
acagaggagagtccggccaatcacaatcgacggcctctgaagaacgaggattctgtgtcc
aatcaaaactgcaaaccattaaaaaccgacgagtcggccactaatcagagccgacggacg
gtcaagatggaagactgtctggagagtcagaaccgacggaacctgaagctcgaggacgga
ccgaccaatgagaaccacaagccggtaaaaacggagcgcgagaacgaggcggacgacgac
atgaacaaatggcctctgaccaacggcaggagcgacctcagcgattggctgagacaccga
gggcaggtcctgaacggagccgcgcgagactactcgcccctgggctggaaccgcagcgcg
cacatcacgcccatccgccccttcccgtgtcgctcgccgccaaaatgcattcaaatggaa
cgccacgtcatccgacccccgcccatcatcccggcccccgaccgactgctgctgaacgac
gaggagtgtcacgcgatgcggcgggagatgtggatgaaggtcttctccttcctcagccac
agagacctgtgtgtgtgcatgcgtgtgtgcaggacctggaacagatggtgctgtgacaag
aagctgtggatggagatcaatctgtcgcgctgtaagtccatcacgccgctcatgctcagc
ggcatcatccgcagacaggcggcgtctctggacctgggctggaccaacatctccaagaaa
cagctgagctggctgatccacaggctgccaggcctgcgcgtgctcctgctgtcggggtgc
tcctgggcggccgtgtcggctctgtgcacctccagctgccccctcctccggactctggac
gtgcagtgggtggagggagtcaaagacgctcagatgagggacctgctgtcgccccctaca
gacaacagaccaggtcagatggacaacaggagtaaactgcgtcacgtggaggacctgcgt
ctgtccgggctggacatcacagacacgtcactgcgtctcatcatccattacatgccctcg
ttgtccaagctgaacctcagctactgcaaccacgtgacggaccagtcggtcaacatcctg
acggccgcggggaccaccaccagggactcgctcaccgaggtcaccttgtcagcctgtaac
cgggtgacggaccaatcgctgaccttcttcaaacgctgcgggaacatctgtctgatcgac
ctgcgctactgcaaacaggtgaccaaggagggctgcgaccagttcgtggcagaaatgtcc
gtcagcgtgcagtttgaactgaaggaggacaaactgctgcagaagatcagctag

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Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (51)   
   KEGG ORTHOLOGY (1)   
   RefGene (47)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (9)   
   Pfam (9)   
All databases (80)   

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