KEGG   Cynoglossus semilaevis (tongue sole): 103390946
Entry
103390946         CDS       T04866                                 
Symbol
ran
Name
(RefSeq) GTP-binding nuclear protein Ran
  KO
K07936  GTP-binding nuclear protein Ran
Organism
csem  Cynoglossus semilaevis (tongue sole)
Pathway
csem03008  Ribosome biogenesis in eukaryotes
csem03013  Nucleocytoplasmic transport
csem03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:csem00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    103390946 (ran)
   03008 Ribosome biogenesis in eukaryotes
    103390946 (ran)
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    103390946 (ran)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csem03019]
    103390946 (ran)
   03009 Ribosome biogenesis [BR:csem03009]
    103390946 (ran)
   03016 Transfer RNA biogenesis [BR:csem03016]
    103390946 (ran)
   03036 Chromosome and associated proteins [BR:csem03036]
    103390946 (ran)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:csem04147]
    103390946 (ran)
   04031 GTP-binding proteins [BR:csem04031]
    103390946 (ran)
Messenger RNA biogenesis [BR:csem03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     103390946 (ran)
Ribosome biogenesis [BR:csem03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    103390946 (ran)
  Pre-60S particles
    103390946 (ran)
Transfer RNA biogenesis [BR:csem03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    103390946 (ran)
Chromosome and associated proteins [BR:csem03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     103390946 (ran)
   Spindle formation proteins
    103390946 (ran)
Exosome [BR:csem04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   103390946 (ran)
GTP-binding proteins [BR:csem04031]
 Small (monomeric) G-proteins
  Ran Family
   Ran
    103390946 (ran)
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU MMR_HSR1 G-alpha Gtr1_RagA AAA_24 RNA_helicase Pox_A32 ArgoMid AAA_7 AAA_16 TsaE AAA_33
Other DBs
NCBI-GeneID: 103390946
NCBI-ProteinID: XP_008325258
Position
15:complement(10354639..10357993)
AA seq 217 aa
MQNNATPCVAAFKLVLVGDGGTGKTTFVKRHVTGEFEKKYVATLGVEVHPLVFHTNRGAI
KYNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPSWHRDLVRVCENIPIVL
CGNKVDIKDRKVKAKSIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKLIGDANLEFVAM
PALAPPEIHMDPQLAAQYEEELQVASATALPEDEDDL
NT seq 654 nt   +upstreamnt  +downstreamnt
atgcagaataacgcgacgccttgtgtcgccgcatttaagttggtgttggtaggtgatgga
ggtaccggaaaaacgacgtttgtcaagagacatgttacaggagagttcgagaagaaatat
gtcgctaccttgggagtggaagtgcatcccctggttttccacactaacagaggagccatt
aagtacaatgtgtgggatacagctggtcaggagaagtttggaggcctgagagatggatac
tatattcaagctcagtgcgctatcattatgtttgacgtcacttctcgagtcacctataag
aacgtgcccagctggcatcgtgatctggtccgtgtctgtgaaaacattcccatcgtcctg
tgtggcaacaaggttgacattaaggacaggaaagtcaaagccaagagcattgtgtttcac
cgcaagaagaacttgcagtactatgacatttctgccaagagtaactacaactttgagaag
cctttcctctggttagcgaggaagttaattggtgatgccaacctggaatttgtggcgatg
cctgcccttgcccccccagagatccatatggacccacaacttgctgcgcaatatgaggaa
gagcttcaggttgcatcagcaacagcacttccagaagacgaagatgacctctaa

  All links  
Ontology (7)   
   KEGG BRITE (7)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (33)   
   KEGG ORTHOLOGY (1)   
   RefGene (29)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (15)   
   Pfam (15)   
All databases (63)   

Download RDF
DBGET integrated database retrieval system