KEGG   Cynoglossus semilaevis (tongue sole): 103391959
Entry
103391959         CDS       T04866                                 
Symbol
ift88
Name
(RefSeq) intraflagellar transport protein 88 homolog isoform X1
  KO
K16474  intraflagellar transport protein 88
Organism
csem  Cynoglossus semilaevis (tongue sole)
Brite
KEGG Orthology (KO) [BR:csem00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:csem03037]
    103391959 (ift88)
Cilium and associated proteins [BR:csem03037]
 Primary cilia and associated proteins
  Intraflagellar transport (IFT) complex B1
   103391959 (ift88)
SSDB
Motif
Pfam: TPR_1 TPR_2 TPR_12 TPR_19 TPR_6 TPR_8 TPR_14 TPR_7 TPR_16 ANAPC3 TPR_11 SNAP TPR_17 TPR_9 TPR-S TPR_10 DUF2225 MIT TPR_MalT DUF6584 TPR_15 DUF2989 Coatomer_E NatA_aux_su SHPRH_helical-1st FumaraseC_C
Other DBs
NCBI-GeneID: 103391959
NCBI-ProteinID: XP_008326671
Position
16:8866988..8883351
AA seq 826 aa
MENVHLAPDEDDLYSGYNDYNPAFDSEELDNDAGFQQAVRTSHGRRPPMTAKFPGTAIGA
RPLATSFGPRTSMTSSMGRPMTGAVLDGAARPMTAVRAAGYTSSLTRGSTFDPLGQSRGP
APPLELKTEDTPEEKIKILEKKVNDLIEESSMAQSMGALQLALEKAKEAGRKERALVRQR
EQSGNGDHINLDLTYSVLLNLANQYENNEMYPEALNSYQVIVKNKMFSNAGRLKVNMANI
YFQQKNYPKAIKFYRMALDQISNAHKEMRIKIMQNIGVVFIRMGQYSDAITSFSHIMGES
PNIKTGFNLILCYYAIGDREMMKKAFQNLISVPLGIDDEDKYIPSNDDPSSNMVVEAIKN
DKLHQMERNLKSLTEKYIMTAAKLIAPAIETSFAAGFDWCVDMVKGSQYVELANDLEINK
AITYLRQKDFNQIEAVETLKTFEKKDSRVKSAAATNLSFLYFLEKDYDQADRYSDLAMNA
DRYNPAALINKGNTVFVRQDYEKAAEFYKEALRNDSSCTEALYNLGLCYKKLSRLDEALD
CFLKLHAILRNSAQVMYQLAQIYELLEDPQQAIEWLMQVISVIPTDPKILAKLGELHDAE
GDKSQAFQYYYESFRYFPSNIDVIEWLGAYYIETQFCEKAIQYFERATLIQPTQVKWQLM
VASCYRRSGNYQKALGTYKDIHRKFPENVECLRFLVRLCTDIGLKEVQEYATRLKKVEKM
KEIREQRVKSGREGSARGRREGRDGSAGSADSSHSSSSAKGERLSAKMRSLPASNEPYET
SSPKELDASYVDPLGPQMERPKTGAKRRVEEDDFADEELGDDLLPE
NT seq 2481 nt   +upstreamnt  +downstreamnt
atggagaatgtgcatttagctccggacgaagatgatctttactccggttacaacgactat
aatcccgcatttgactccgaggagttggataatgatgcaggatttcagcaagcagtgagg
acaagtcatggaagaagacctcctatgacggccaagtttcctggcacagctattggagct
cgtcctcttgctacttcatttggtcctcggacttctatgacctcatcaatgggcagacca
atgactggagctgtgctggatggagctgcccgacccatgaccgcagtcagagctgcaggt
tacacatcatcactgacccgtggttcaacctttgaccctttgggtcagtccagaggccct
gctcctcctttggaattaaagactgaggatacgcctgaggagaagatcaaaatcctggaa
aaaaaagtaaatgacctaatagaagagagttccatggcacagagcatgggagccctgcag
ctggctcttgaaaaagcaaaagaagcggggaggaaggagagagctctggtgaggcagaga
gaacagtctggaaatggagaccacatcaatttagatctcacttactctgttttgctgaac
ctggccaaccagtacgagaacaatgaaatgtacccagaggctctgaacagttaccaggtc
atagtaaagaacaagatgttcagcaatgcaggccggctcaaagtcaacatggccaacatc
tacttccaacagaaaaactaccccaaagccatcaagttctaccgcatggccctggaccag
atctccaatgctcacaaggagatgaggatcaagatcatgcagaacattggtgtggttttc
atacgtatgggccagtattcagatgccattacgtccttcagtcacatcatgggcgagagc
cccaacattaagactggcttcaacctcattctgtgctactacgccatcggagacagagag
atgatgaagaaggcctttcagaacctcatctctgtccctctgggaatcgatgacgaggac
aagtacatcccatccaacgacgaccccagttcaaacatggtggttgaagccattaagaac
gacaagcttcaccagatggagagaaatctaaaatccctgactgaaaaatacatcatgacg
gctgccaagctcattgctcctgctattgaaacttcatttgctgctggattcgactggtgt
gtggacatggtgaaaggttcccagtatgttgaactggccaacgatctggagatcaacaaa
gccatcacctacctcagacagaaggacttcaaccaaattgaggcagtagaaaccttgaaa
acgtttgagaagaaggacagcagagtgaagagtgcggcagccaccaacctctctttcctt
tacttcctggagaaggactatgaccaggctgaccgttattctgatctggccatgaacgca
gaccgctacaatccagccgctctgatcaacaagggcaacacggtgtttgtcagacaggac
tacgagaaggcagcagagttctacaaagaggctctgaggaacgactcctcctgcactgag
gccctgtacaacctcgggctgtgctataagaaactcagccgtctggacgaggctctggac
tgtttcctcaagctccatgctattctgaggaacagtgctcaggtcatgtaccagctggcc
caaatctatgaactcctggaggatccccaacaggccattgagtggttgatgcaggtgatc
agtgtgatccccactgaccctaagatactggccaaactgggagagttacatgacgcagag
ggcgacaagtcccaggcgtttcagtactactatgagtccttcaggtattttccgtctaac
attgatgtgatcgagtggctgggggcctactacatcgagactcagttctgcgaaaaagcc
attcagtattttgagagagctacactcatacaaccaacacaggtgaagtggcagctgatg
gtagcgagctgctacagaaggagtggaaactaccagaaagctttgggcacgtataaagac
atccaccgcaagtttccagagaatgttgaatgtctgcgatttctggtgaggctatgcaca
gacataggcctgaaggaagtccaggaatacgccaccagactgaagaaggtggagaagatg
aaggaaatcagagaacagagagtgaaatcagggcgagagggcagcgccagaggtcgcaga
gaaggcagagatgggagcgctgggagtgcagacagcagccacagcagcagcagtgctaaa
ggggagcgactcagcgccaagatgcgatcacttcctgcctccaacgagccctacgagacc
agcagcccgaaagagctggacgcatcctacgtggacccactgggacctcagatggaaaga
ccaaagacgggagccaagagacgcgtggaagaggacgattttgcagatgaagagttggga
gacgacctgctgccggagtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (33)   
   KEGG ORTHOLOGY (1)   
   RefGene (29)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (26)   
   Pfam (26)   
All databases (68)   

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