KEGG   Cynoglossus semilaevis (tongue sole): 103393304
Entry
103393304         CDS       T04866                                 
Symbol
actb
Name
(RefSeq) actin, beta
  KO
K05692  actin beta/gamma 1
Organism
csem  Cynoglossus semilaevis (tongue sole)
Pathway
csem03082  ATP-dependent chromatin remodeling
csem04145  Phagosome
csem04210  Apoptosis
csem04510  Focal adhesion
csem04520  Adherens junction
csem04530  Tight junction
csem04810  Regulation of actin cytoskeleton
csem04814  Motor proteins
csem04820  Cytoskeleton in muscle cells
csem05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:csem00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    103393304 (actb)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    103393304 (actb)
  09143 Cell growth and death
   04210 Apoptosis
    103393304 (actb)
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    103393304 (actb)
   04520 Adherens junction
    103393304 (actb)
   04530 Tight junction
    103393304 (actb)
  09142 Cell motility
   04814 Motor proteins
    103393304 (actb)
   04820 Cytoskeleton in muscle cells
    103393304 (actb)
   04810 Regulation of actin cytoskeleton
    103393304 (actb)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    103393304 (actb)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:csem03021]
    103393304 (actb)
   03019 Messenger RNA biogenesis [BR:csem03019]
    103393304 (actb)
   03036 Chromosome and associated proteins [BR:csem03036]
    103393304 (actb)
   03029 Mitochondrial biogenesis [BR:csem03029]
    103393304 (actb)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:csem04812]
    103393304 (actb)
   04147 Exosome [BR:csem04147]
    103393304 (actb)
Transcription machinery [BR:csem03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     103393304 (actb)
Messenger RNA biogenesis [BR:csem03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Factors that have mRNA localization signals
     103393304 (actb)
Chromosome and associated proteins [BR:csem03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    TIP60 complex
     103393304 (actb)
    NuA4 complex
     103393304 (actb)
  Chromatin remodeling factors
   BAF complex
    103393304 (actb)
   PBAF complex
    103393304 (actb)
   GBAF(ncBAF) complex
    103393304 (actb)
   SWR1 complex
    103393304 (actb)
Mitochondrial biogenesis [BR:csem03029]
 Mitochondrial quality control factors
  Mitochondrial dynamics
   Actin cytoskeleton organization
    103393304 (actb)
Cytoskeleton proteins [BR:csem04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actins
    Actins
     103393304 (actb)
Exosome [BR:csem04147]
 Exosomal proteins
  Proteins found in most exosomes
   103393304 (actb)
SSDB
Motif
Pfam: Actin
Other DBs
NCBI-GeneID: 103393304
NCBI-ProteinID: NP_001295108
UniProt: A0A0A7DHF9
Position
17:complement(11978794..11982960)
AA seq 375 aa
MEDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL
AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMGTAASSSSLEKSY
ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTYNSIMKCDVDIRKDLYANTVLS
GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
EYDESGPSIVHRKCF
NT seq 1128 nt   +upstreamnt  +downstreamnt
atggaagatgaaatcgccgcacttgttgttgacaacggatccggtatgtgcaaagccgga
ttcgctggagatgacgccccacgtgctgtcttcccctccatcgtcggtcgccccaggcat
cagggagtgatggtgggtatgggccagaaggacagctacgttggtgatgaagcccagagc
aagagaggtatcctgaccctgaagtaccccatcgagcacggtattgtgaccaactgggat
gacatggagaagatctggcatcacaccttctacaacgagctgagagttgcccctgaggag
caccccgtcctgctcacagaggctcccctgaaccctaaagccaacagggaaaagatgacc
cagatcatgtttgagaccttcaacacccccgccatgtacgttgccatccaagctgtgctg
tccctgtatgcctctggtcgtaccaccggtatcgtcatggactccggtgatggtgtgacc
cacacagtgcccatctacgagggctacgccctgccccacgccatcctgcgtctggacttg
gccggccgcgacctcacagactacctcatgaagatcctgacagagcgtggctactctttc
accaccacagccgaaagagaaattgtgcgtgacatcaaggagaagctgtgctatgtcgcc
ttggacttcgagcaggagatgggcaccgctgcctcttcctcctccctggagaagagctac
gagctgcccgacggacaggtcatcaccatcggtaatgagaggttccgttgcccagaggcc
ctcttccagccttccttccttggtatggagtcctgtggcatccacgagaccacctacaac
agcatcatgaagtgtgacgtcgacatccgtaaggacctgtatgccaacactgtgctgtct
ggaggtaccaccatgtaccctggcatcgccgacaggatgcagaaggagatcacagccctg
gctccatccaccatgaagatcaagatcattgccccaccagagcgtaaatactctgtctgg
atcggaggctccatcctggcttccctgtccaccttccagcagatgtggatcagcaagcag
gagtacgatgagtccggcccctccatcgtccaccgcaaatgcttctaa

  All links  
Ontology (7)   
   KEGG BRITE (7)   
Pathway (10)   
   KEGG PATHWAY (10)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4715)   
   KEGG ORTHOLOGY (1)   
   RefGene (4711)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (1)   
   Pfam (1)   
All databases (4743)   

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