KEGG   Cynoglossus semilaevis (tongue sole): 103393874
Entry
103393874         CDS       T04866                                 
Symbol
lsm7
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7
  KO
K12626  U6 snRNA-associated Sm-like protein LSm7
Organism
csem  Cynoglossus semilaevis (tongue sole)
Pathway
csem03018  RNA degradation
csem03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:csem00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    103393874 (lsm7)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    103393874 (lsm7)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csem03019]
    103393874 (lsm7)
   03041 Spliceosome [BR:csem03041]
    103393874 (lsm7)
Messenger RNA biogenesis [BR:csem03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     103393874 (lsm7)
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     103393874 (lsm7)
Spliceosome [BR:csem03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    103393874 (lsm7)
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 103393874
NCBI-ProteinID: XP_008329212
Position
2:complement(2618687..2620434)
AA seq 103 aa
MADKEKKKKESIFDLSKYIDKPIRVKFQGGREASGVLKGFDPLLNLVLDGTIEYMRDPDD
QLKLTEDTRQLGLVVCRGTSVVLICPQDGMEAIPNPFIQQQDG
NT seq 312 nt   +upstreamnt  +downstreamnt
atggcggacaaagagaagaagaagaaggaaagcatctttgacttgtcaaagtacatcgac
aagccgattcgtgttaagttccaaggaggaagagaggctagtggtgtcctgaaaggattc
gatcctcttttaaacctcgtactggacggaacaatcgagtacatgcgtgatccagatgat
cagctgaagctgacagaagacaccaggcagctggggctggtggtctgcagagggacctct
gtggtcctcatctgtcctcaggatggcatggaggccataccaaacccatttatacaacaa
caagatggctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (39)   
   KEGG ORTHOLOGY (1)   
   RefGene (35)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (48)   

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