KEGG   Cynoglossus semilaevis (tongue sole): 103399640
Entry
103399640         CDS       T04866                                 
Symbol
hps3
Name
(RefSeq) Hermansky-Pudlak syndrome 3 protein isoform X1
  KO
K20190  Hermansky-Pudlak syndrome 3 protein
Organism
csem  Cynoglossus semilaevis (tongue sole)
Brite
KEGG Orthology (KO) [BR:csem00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:csem04131]
    103399640 (hps3)
Membrane trafficking [BR:csem04131]
 Endosome - Lysosome transport
  Others
   BLOC-2 complex
    103399640 (hps3)
SSDB
Motif
Pfam: HPS3_C HPS3_N
Other DBs
NCBI-GeneID: 103399640
NCBI-ProteinID: XP_008336519
UniProt: A0A3P8UP66
Position
2:complement(11899848..11910835)
AA seq 1053 aa
MVHVYNCHPFASQQIVQVEQEPGLFCSGGGALFVVVTGGCKVEAYNLEQEGCPLICRFGT
MGTVRNIQYSKIGDYLVTIEEKNSATYLRAYTNWRYQAEERSRVGVRLLGHLLRGASQRG
GAQMEIIEIPLSERPVSVACCSVTGDLLVGCENTLVLFTLRRQNQENLQNQSQQNVQSSS
SLNSQQTFGQSEGHSSSSDHSVSILDFERSVIMHIPNFTPKKVALCSGYVAVQTELEALV
LKLNTSESDALDESCDMSKTDLLEDQSDLLLIPRQQELLGSQAKNCDVPVSIEKTGLEDK
GQYKLSYVLFRRFTPEFFTGCSVEETQLHSMQLHPLFTSNQSTSTEEPACVFCFFSLPSA
GYLYSLKNGVELLSAYQYPERVLEAVLTDHLLHVITKNALQCFTVRCAAVAARIEEPYID
TTMKACPPSSLEVCALRMQLFIGLRSVCVHGPHVILLSTADTQTQEEPERVQQRRGLHLK
EHTTLAGIFLAVGIDPTTTPALESFLSRPFLARRWTTSPPKESTPTGHGWNLYVVDTVSP
LTLYNEMVEYSRQYAETNPSAQSLRHLLSEAHLLLCSSLLQTTEQTHRKDLEEALRENCA
QLGDCFSRSSQKDCHLALPYYRMSGLSVTEVIARNRPLPSSPHSYGLGFLFYLNHYLLEE
TEEILSQESADEVIDIFSQSESSALISVCASPSMINISADRTLQVLHRLEDTAGVSVPLT
ITMATLALRLDDLQQFMQLLDRHAEMLLVYGFIEEPRLLIHGGGGGSQAYVRPTALTQQL
AKSQPGLLVAGMVALHENNKVQLEQADGVFKELGCENCLLVDFWEATLMASSQDAVIQEL
LFRLTSVYIDRLLCTNPDKRSIFPQSPLRHKSLKSADDLINSCSHYGALYPWLIILCPPY
TTSCLHQEALHKLQSLLCGPLSVGFVLPLLERLSDETMWGFSLHLLCETRRGRYDSSIGT
LLDRCPQAIIAYANHHLQDKHLELWWQKLLPELCNRTRASADNSILLAALKETLVVVAAE
TNPTQFLELLPDDGTASYFLPHLLTCTQKHLLA
NT seq 3162 nt   +upstreamnt  +downstreamnt
atggtgcatgtgtataactgccacccatttgcttcacagcagattgtgcaggtggagcag
gagcctggattgttttgttctggaggtggggctctctttgtggtggttacaggaggatgc
aaggtggaggcctacaatctggagcaggagggctgtccactcatctgccgatttggcact
atgggcacagtgagaaacatccaatacagcaaaattggagactacctggtgaccattgaa
gaaaaaaacagcgccacctacctgagagcctacactaactggagataccaggctgaagag
agatcccgtgttggggtgcgtttgttgggccacctgctgcgtggagcatctcagcggggt
ggagctcagatggagatcattgaaatccctctctcggagcgtcccgtcagtgtggcctgc
tgctctgtcaccggagacctgctggtcggctgcgagaacactttggttttgtttacttta
cggagacagaaccaagagaacctgcagaatcagagtcagcagaatgtccagagctcctcc
tccttaaactctcagcagacttttggtcagagtgaaggtcactcctcaagttcagaccac
agtgtctccatcctggacttcgaacgctcagtcatcatgcatattcccaactttacacct
aagaaggtggcgctgtgttcaggatatgtggcagtgcagacggagctggaggcgctggtg
ttaaaactgaacacatctgaatctgacgctctggacgagtcttgtgacatgagtaagaca
gatctgctggaggaccagagtgaccttctcctcatcccgaggcagcaggagttactgggg
agtcaggccaaaaactgtgacgtcccagtcagcattgagaagacggggctggaggacaag
ggacagtacaaactgtcatatgtgctttttaggcgttttactccagagtttttcacgggc
tgcagtgttgaggagacgcagcttcactccatgcaacttcacccacttttcaccagtaac
cagtcaacatccacagaagaaccagcctgtgtcttctgcttcttctccctccccagtgct
ggttatctgtacagtctgaagaacggagttgagttgctctcagcctatcagtatccagag
agagtcctggaggcggtgctaacagaccacctgctgcatgttataactaaaaatgcgttg
cagtgttttactgtgcgctgtgcagcggttgcagccaggattgaagagccatacattgac
accaccatgaaggcctgtccacccagcagtctggaggtgtgtgctctcaggatgcagctg
tttattggccttcgctctgtgtgtgtccacggtcctcatgtcatcctcctgtccacggcg
gacacccagacacaggaagaacctgaacgcgtccagcagcgcaggggactccatttgaaa
gaacacaccacgctggctggtattttcctggccgtgggaatcgatcccactaccactccg
gctctggagagctttctgtcacgccccttcctagccaggagatggacaacgtcgcccccc
aaagaaagcaccccaaccggacacggctggaacctctatgtggtggacaccgtctccccc
ctgactctttacaatgagatggttgagtacagtcgacaatacgctgaaaccaacccttca
gcccagagccttcgacacctcctcagtgaagctcacctcctcctgtgctcctccctgctg
caaacaacagagcagactcacagaaaagacctggaggaggcgctcagggagaactgtgct
cagctgggagactgcttcagcaggtcgagtcagaaagattgtcacctggccttaccttac
tacaggatgtctggtctgtcagtcacagaggtgatcgccagaaaccgcccacttcccagc
agccctcactcatatggccttggctttctgttttatctgaatcattacctgttggaagaa
actgaagaaatcctcagtcaggagtcagctgatgaggtcatcgacattttcagccaatca
gagtcctcagcgctcattagcgtatgtgccagcccgtccatgatcaacatcagcgctgat
aggacgctgcaggttttacatcgcctggaagacacagcaggtgtctctgttccgctgacc
atcaccatggcaactctggcgctgcgattagacgacctgcagcagttcatgcagctgttg
gatagacacgctgagatgcttctggtgtatggtttcatcgaggagcccaggttgctgatt
cacggtggaggtggaggctcccaggcatacgtccgccccacagccctgactcagcagctg
gcaaagtcccagccaggcctcctggtggccggcatggtggctctacacgagaacaacaag
gttcagctggaacaggcggacggtgtcttcaaggagctgggctgtgagaactgcctcctg
gtggatttctgggaggcaacactcatggcttcttcacaggacgccgtcatccaggagctt
ctgttcagactcacctctgtctacattgatcgactgttgtgcactaatcctgataaacgc
tccattttccctcagtcacccctgagacacaagtcactcaaaagcgcagatgatttgatc
aactcatgctcccattacggtgccttgtatccatggctcatcattctctgtcctccttac
actaccagctgcctacaccaggaggcgttacacaaactgcagtctctgttgtgtggtcct
ctgtctgttggattcgtcctgcctctgctggagcgactctcagacgaaaccatgtggggc
ttcagtctgcacctgctttgcgagaccagaagggggcgatatgacagcagcattggaacg
ttgttagaccgatgccctcaggccattatagcatacgctaatcatcacctacaagacaag
cacttggaactgtggtggcagaagctgctgccagagctttgtaatcggaccagagcctct
gcagacaacagcatcttattggctgctctcaaagagacactggtggtggttgccgcggag
accaatcccacccaattcctggagcttctacctgatgatggcacagcgtcatattttctg
cctcacctgttgacgtgtacccaaaaacacctgctggcctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (22)   
   KEGG ORTHOLOGY (1)   
   RefGene (18)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (7)   
   UniProt (1)   
   RefSeq(pep) (6)   
DNA sequence (6)   
   RefSeq(nuc) (6)   
Protein domain (2)   
   Pfam (2)   
All databases (40)   

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