KEGG   Clostridium septicum: CP523_10715
Entry
CP523_10715       CDS       T06069                                 
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
  KO
K03215  23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
Organism
csep  Clostridium septicum
Brite
KEGG Orthology (KO) [BR:csep00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:csep03009]
    CP523_10715
Enzymes [BR:csep01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.190  23S rRNA (uracil1939-C5)-methyltransferase
     CP523_10715
Ribosome biogenesis [BR:csep03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    CP523_10715
SSDB
Motif
Pfam: tRNA_U5-meth_tr Methyltransf_31 MTS Methyltransf_25 N6_N4_Mtase Cons_hypoth95 Methyltransf_15 Met_10 PrmA Methyltransf_32 TRAM Methyltransf_11 Methyltransf_12 Methyltrans_SAM FtsJ PCMT UPF0020 QRPTase_C Methyltransf_4 Ubie_methyltran Saf-Nte_pilin DOT1
Other DBs
NCBI-ProteinID: AYE34837
UniProt: A0A9N7JNH1
Position
2336281..2337636
AA seq 451 aa
MRRGSALQVKIEKTEFPSVGIGTVGDKKIFVKGAFPGQIVTGKVKKRRQEYAELKLLSVD
EKADYEIEAPCKYFGICGGCSSQNLTYEKQLELLNGEVKNLFEKGNAPMGEYLGVVGSKN
QWEYRNKMEFTFGDFEKGGELTLGMHMKGKSFGIITVDNCMIVDEDFRTVIKATVDYFKD
KELPYYRVMRREGYLRHLVIRKAINTGELMVNLVTTTQIDFDLTEYVEVLKSRIYKGQLV
SVLHTENDSFSDAVVPEKVNLLYGKDYIVENLLGLKFKISPFSFFQTNTQGAESLYSIVR
DFMGESSDKVVFDLYCGTGTIGQIAAANAKKVIGIELIEEAVEAAKENAKLNGLNNCEFL
AGDVGEIIKTIKVKPDIIILDPPRSGVHPKALEYVIKFNAKEIIYVSCNPKTLVENLETL
VASGYEVIKSTVKDMFPNTPHAETVVKLIKK
NT seq 1356 nt   +upstreamnt  +downstreamnt
atgagaagaggtagtgcactacaagttaaaatagaaaagacagagtttccatcagtaggt
ataggtacagttggagacaaaaaaatatttgtaaaaggagcatttccagggcaaatagtt
acaggaaaagtaaaaaaaagaaggcaagaatatgcagagttaaagcttttatcagttgat
gaaaaagctgattatgaaatagaagcgccatgtaaatactttggaatttgtggtggatgt
agctcacaaaatcttacttatgaaaaacaattagaacttttaaatggtgaagtaaagaat
cttttcgaaaaaggaaatgctcctatgggagagtatttaggtgttgttggaagtaagaat
caatgggagtatagaaataaaatggaattcacctttggagactttgaaaaaggtggagaa
cttacacttggaatgcacatgaaaggaaaatcatttggtattattacagttgataattgt
atgatagtagatgaagactttagaactgttataaaagcaactgttgattactttaaagat
aaggaattaccttattatagagtaatgagaagagaaggttacttaaggcatttagtaata
agaaaagctattaatacaggagaattaatggttaatttagtaactacaactcaaattgac
tttgatttaactgagtacgtagaagtattaaaaagtagaatttataaagggcaattagtt
tctgtattacacacagaaaatgattctttctcagatgcagttgtgccagaaaaagtgaat
ttattatatggaaaagattatatagtagaaaatttattaggattaaaatttaaaatatca
ccattttcattcttccaaactaatacacaaggggcagaaagtctttatagtatagtaaga
gattttatgggagaatcttctgataaggtagtatttgacttatattgtggaacaggaact
ataggacaaatagcagcagcaaatgctaaaaaggttataggtatagaacttatagaagaa
gctgttgaagcagcaaaggaaaatgctaaattaaatggattaaacaattgtgagttttta
gctggtgatgtaggagagataataaaaactataaaagtgaaaccagatataattatatta
gatcctccaagaagtggggttcatcctaaggctttagaatatgtaataaaatttaatgca
aaagagataatttatgtttcatgtaatcctaaaacattagttgaaaatttagaaacatta
gttgcctcaggttatgaggtaataaagagtactgttaaggatatgttccctaacacacca
catgcggagactgttgttaaacttataaagaagtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (22)   
   Pfam (22)   
All databases (30)   

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