KEGG   Comamonas serinivorans: CCO03_16520
Entry
CCO03_16520       CDS       T04892                                 
Name
(GenBank) DNA-formamidopyrimidine glycosylase
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
cser  Comamonas serinivorans
Pathway
cser03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:cser00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    CCO03_16520
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cser03400]
    CCO03_16520
Enzymes [BR:cser01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     CCO03_16520
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     CCO03_16520
DNA repair and recombination proteins [BR:cser03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     CCO03_16520
SSDB
Motif
Pfam: Fapy_DNA_glyco H2TH zf-FPG_IleRS
Other DBs
NCBI-ProteinID: ARU06055
UniProt: A0A1Y0EQX8
Position
complement(3883707..3884516)
AA seq 269 aa
MPELPEVEVTRQSLQKLAGAQVQRVRLGAALRWPLGVAPEHLVGRTITEVARRGKYLLLR
LDEGVLLVHLGMSGRLALVDAALPPGKHDHVDVFTDVGLLRLHDPRRFGAVVWAAGEEAA
EARKLLGRLGVEPFSEAFTVAHLQQGVAARRAPIKQVLLAGDIVVGVGNIYASEALFLAR
IRPTRAANTLKPREVVRLHAAIVEVLARAVREGGSSLRDFQSPEGVNGHYQHEAHVYGRA
GEPCRVCGQAVRMIRQGQRSSFYCLRCQK
NT seq 810 nt   +upstreamnt  +downstreamnt
atgccggaactgcccgaagtcgaagtcacccgacaaagcctgcaaaagctcgcgggcgcg
caggtgcagcgggtgcgcctgggggcggccttgcgctggccgctgggggtggcccccgag
cacctggtcggccgcaccatcaccgaggtggcacggcgcggcaagtatctgctgctgagg
ctggacgagggcgtgctgctggtgcacctgggcatgtcgggccggctggccctggtcgat
gcggccctgccgccgggcaagcacgatcacgtcgacgtgttcaccgacgtgggcctgctg
cgcctgcacgacccgcgccgctttggcgccgtggtctgggccgccggcgaggaggcggcc
gaggcccgcaaactgctgggccgcctgggcgtggagccgttctccgaggccttcaccgtg
gcccacctgcagcagggcgtggccgcgcggcgcgcgcccatcaagcaggtgctgttggcg
ggggacatcgtcgtgggggtgggcaacatctacgcgtcggaggcgctgttcctggcccgc
atccggcctacacgggcggccaacaccctcaaaccgcgcgaggtggtgcgcctgcacgcg
gccatcgtcgaggtgctggcgcgtgcggtgcgcgagggcggctccagcctgcgcgacttc
cagagcccggagggcgtcaatggccactaccagcacgaggcccacgtctacggacgcgcc
ggcgagccctgccgcgtctgcggccaggccgtgcgcatgatccgtcagggacagcgctcg
agtttttactgtctgcggtgccagaagtag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (14)   

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