KEGG   Campylobacter subantarcticus LMG 24377: CSUB8523_0165
Entry
CSUB8523_0165     CDS       T03572                                 
Symbol
topA
Name
(GenBank) DNA topoisomerase I
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
csf  Campylobacter subantarcticus LMG 24377
Brite
KEGG Orthology (KO) [BR:csf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:csf03032]
    CSUB8523_0165 (topA)
   03400 DNA repair and recombination proteins [BR:csf03400]
    CSUB8523_0165 (topA)
Enzymes [BR:csf01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     CSUB8523_0165 (topA)
DNA replication proteins [BR:csf03032]
 Prokaryotic type
  DNA Topoisomerases
   CSUB8523_0165 (topA)
DNA repair and recombination proteins [BR:csf03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      CSUB8523_0165 (topA)
SSDB
Motif
Pfam: Topoisom_bac Toprim zf-C4_Topoisom Toprim_4 DUF1272 Toprim_2 Lar_restr_allev DUF3653 Toprim_3
Other DBs
NCBI-ProteinID: AJC91735
Position
complement(140612..142474)
AA seq 620 aa
MKNLIIVESPAKAKTIGNFLGKDYEVIASKGHIRDLPKTSFGIKIEDENFKPEYRISNDH
SNLVKELKEKAKKAKTIYLATDEDREGEAIAYHIAKAINKDESTLPRIVFHEITKSAIEN
ALKNPRSLNINSVNAQQTRRLLDRIVGYKLSPLLNQKIQKGLSAGRVQSAALKIIVDRER
EIKAFIPLKYFSIDMVFEKDLQAELVEFQNQKIEKLSLTNEDRAKLIFNACKNANFKVKN
IESKDRKIAPQAPFMTSTLQQSASNRLGFNPKKTMMIAQKLYEGVKTHQGIMGVITYMRT
DSLNIAKEALEEVRKLIQNEFGKEYLPSKANIYTTKSKGAQEAHEAIRPTNLSFTPKLAN
EFLEKDEARLYTLIYNRFLASQMNPAISQTQNVYARSSEASFKISGRKILFDGHYKIYGD
MDKDKILPNLKLEDTLNIQTIELNSHFTEPPSRYSEAGLVKKLENLGIGRPSTYAPTISL
LSAREYVYIDKKQIIPNEIAFVVTEVLEQNFSDIVDSDFTSKMEDTLDIIAEGKMDWQEV
LREFYFPFMRKIDEGKRNIKSQKTVTKLDETCPDCGGELAIRKGRYGEFVACLNFPKCKY
SRNLKQETQNEKKARKNSTP
NT seq 1863 nt   +upstreamnt  +downstreamnt
atgaaaaatttaatcatagtagaatcgcctgccaaagctaaaaccataggtaatttttta
ggtaaagactacgaagtcatcgcctccaaagggcacattagagatctacctaaaactagc
tttggtataaaaatagaagatgaaaacttcaaacccgaatatagaatttcaaacgatcac
tcaaacttggtaaaagaactcaaagaaaaagctaaaaaagctaaaaccatctaccttgca
accgatgaggaccgcgagggagaagccatagcttatcatatagccaaagctattaataaa
gatgaaagcactttgccacgcatagtttttcatgaaatcaccaaaagtgctatcgaaaac
gctttaaaaaacccaagatctttaaacataaacagcgtcaacgcccagcaaactagacgc
ttgcttgatcgtatcgtaggctacaaacttagccccttactcaatcaaaaaattcaaaaa
ggcctaagcgcaggacgtgtgcaaagtgcagctttaaaaatcatcgtcgatagagaaaga
gaaatcaaagcttttattcctttaaaatactttagtattgatatggtttttgaaaaagac
ttacaagcagaactagttgaatttcaaaaccaaaagatagaaaagctaagtctaactaac
gaagacagggcaaaattaatctttaatgcttgtaaaaatgcaaattttaaggtcaaaaac
atagaaagtaaagatagaaaaatagctcctcaagcaccttttatgacctcaacattacag
caaagcgcaagtaatcgtttaggatttaaccctaaaaaaactatgatgatcgctcaaaaa
ctttatgaaggtgtaaaaacgcatcaaggtatcatgggtgtgatcacttatatgagaact
gatagtttaaatatcgcaaaagaagccttagaagaagtaagaaagctcattcaaaatgaa
tttggtaaagaatacctaccaagcaaagcaaatatctataccaccaaaagcaaaggcgcc
caagaagcccatgaagccataagaccaaccaatctaagctttactccaaagcttgcaaat
gaatttttagaaaaagatgaagcaagattatatactttgatctacaatcgttttttggct
tcacaaatgaaccctgccatctctcaaactcaaaatgtgtatgcgagatcaagcgaagca
agttttaaaataagtggtagaaaaattttatttgatggtcattataaaatttatggagat
atggataaagacaaaatcttgcctaatttaaaactagaagatacactaaatatccaaact
atagaactcaactcacactttaccgaaccaccttcaagatactctgaagctggacttgtt
aaaaagctagaaaatcttggtataggacgcccctctacttatgctcccactatctcttta
ctgagtgcaagagagtatgtatatatagataaaaagcaaatcatacctaatgaaatagcc
tttgttgtcacagaagtattagaacaaaattttagcgatatcgtagatagtgattttacc
tccaaaatggaagacacacttgacattattgcagaaggtaagatggattggcaagaagtt
ttacgagaattttattttccttttatgagaaaaatcgatgagggcaagagaaatatcaaa
agccaaaaaacagttaccaagctagatgaaacttgtcctgattgcggtggagaacttgcc
ataagaaaaggaagatatggggaatttgtagcttgtttaaactttccaaaatgcaaatat
tcaagaaatttaaaacaagaaacacaaaatgaaaaaaaagcgagaaaaaactcaacacca
tag

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (9)   
   Pfam (9)   
All databases (18)   

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