KEGG   Clostridium saccharolyticum WM1: Closa_0800
Entry
Closa_0800        CDS       T01288                                 
Name
(GenBank) excinuclease ABC, B subunit
  KO
K03702  excinuclease ABC subunit B
Organism
csh  Clostridium saccharolyticum WM1
Pathway
csh03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:csh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    Closa_0800
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:csh03400]
    Closa_0800
DNA repair and recombination proteins [BR:csh03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Closa_0800
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      Closa_0800
SSDB
Motif
Pfam: UvrB_inter UvrB Helicase_C ResIII UVR DEAD AAA_30 AAA_22 SWI2_SNF2 DUF6809 Kinesin Microtub_bd UB2H AAA_14
Other DBs
NCBI-ProteinID: ADL03423
UniProt: D9R5Y9
Position
867355..869340
AA seq 661 aa
MDFILHSEYDPTGDQPQAIDQLVKGFQEGNQFQTLLGVTGSGKTFTMANVIQKLQRPTLI
IAHNKTLAAQLYSEFKEFFPENAVEYFVSYYDYYQPEAYVPSTDTYIEKDSAINDEIDKL
RHSATAALSERKDVIIVASVSCIYGLGSPIDYQEMVISLRPGMIKDRDEVVHKLIDIQYD
RNDMDFRRGTFRVRGDVVEIFPAYSGSEAYRVEFFGDEVERITEIDTLTGEIRAELGHVA
IFPASHYVVSREKMELAAQTILEELKEQVAYFKSEDKLLEAQRISERTNFDVEMMKETGF
CSGIENYSRHLTGGRPGDPPYTLIDYFPDDFLIIVDESHITLPQVRGMFAGDRSRKTTLV
NFGFRLPSALDNRPLNFEEFESKINQMMFVSATPSVYEAEHELLRVEQIIRPTGLLDPEI
DVRPVEGQIDDLVSEVNKEISKKNKVLITTLTKRMAEDLTDYMREVGIRVKYLHSDIDTL
ERSEIIRDMRLDVFDVLVGINLLREGLDIPEITLVAILDADKEGFLRSETSLIQTIGRAA
RNSEGHVIMYADKVTDSMRVAIEETNRRRAIQQLYNEEHGITPTTIKKSVRDLIAISKAA
IEEEKDFKKDPESMDAKELEKLAKELTKKMHQAAAELNFEEAARLRDRMVQIKKMLQDME
D
NT seq 1986 nt   +upstreamnt  +downstreamnt
atggactttatattgcattcagaatatgaccctaccggtgaccagcctcaggccattgac
cagcttgtgaagggattccaggagggcaatcaattccagaccctgcttggggtcacaggc
tctggtaagacctttaccatggctaatgtgatccagaagctgcagaggcctactctaatc
atcgctcataataagacgcttgccgcccagctttacagcgagttcaaggagttcttcccg
gaaaatgcggtggagtattttgtttcctattatgattattaccagcctgaggcatatgtg
ccttccacagacacctatatagaaaaggattctgctattaatgatgagatagacaagctc
cggcactcggctacagcggccctatcggaacggaaggatgtaatcatcgtagcatcggtt
tcctgtatttacggcctgggaagccctatcgattatcaggaaatggttatttccttaaga
cccggcatgatcaaggacagggatgaagtggtccataagctgattgacatccagtatgac
cggaatgatatggatttcaggcgcgggaccttccgggtaagaggagatgtggtggagata
ttccctgcctattccggaagcgaggcctaccgggtggaattttttggagatgaagtggaa
cgcattacggagatcgataccctgaccggagagattcgggcggagttggggcatgtggcc
atattcccggcctcccattacgtggtatcaagggagaagatggagctggcagcacagaca
atcctggaggaattaaaggagcaggtggcatattttaaaagcgaggacaagctgttagag
gcccagaggatatcagagcggacaaatttcgatgtggaaatgatgaaggaaaccggcttt
tgctccgggatcgagaactattccaggcatttaaccggcggccgtccaggagaccccccc
tataccctgatcgattatttccccgatgactttctgatcatagtggatgaatcccacatc
accctgcctcaggtgcggggcatgtttgctggagaccgatccaggaagaccactcttgtg
aattttggtttccgccttccctctgcccttgataaccggcctttgaattttgaggaattt
gagtcaaagatcaatcagatgatgttcgtttctgccacaccttccgtatatgaggcggag
catgagcttttaagggtggagcagatcatccggcctaccgggcttctggatcctgaaatc
gatgtaaggccggtggaaggacagatcgatgacctggtttccgaggtaaataaggaaatt
tcaaagaaaaacaaggtactgatcactaccctgaccaagcggatggcagaggatttaacc
gattacatgagagaagtaggaatccgggtcaaatacctccattccgatattgataccctg
gagcgctctgaaatcatccgggatatgcgtctggatgtgtttgatgtgcttgtagggatc
aaccttctgcgggagggccttgatattccggaaatcactttggtggcgatcctggatgcg
gacaaagagggatttctccggtctgagacctctctgatccaaaccataggaagggcggcc
agaaattccgaaggccatgtgattatgtacgcagataaggtgacggattccatgcgcgtg
gcgattgaggagaccaaccgaaggagagccatacagcagctctataatgaagagcatgga
atcacacccaccaccatcaagaagtcggtccgtgaccttattgccatctcaaaagcagcc
attgaggaagagaaggactttaaaaaggatccggaatccatggatgcaaaagaattggag
aagcttgcaaaggagcttacaaagaagatgcaccaggcggcagcagagctgaatttcgag
gaagctgccaggctgcgtgaccggatggtacagattaagaaaatgcttcaggatatggaa
gattaa

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