KEGG   Chryseobacterium shandongense: EG350_17970
Entry
EG350_17970       CDS       T05920                                 
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
csha  Chryseobacterium shandongense
Pathway
csha03410  Base excision repair
csha03430  Mismatch repair
csha03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:csha00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    EG350_17970 (recJ)
   03430 Mismatch repair
    EG350_17970 (recJ)
   03440 Homologous recombination
    EG350_17970 (recJ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:csha03400]
    EG350_17970 (recJ)
DNA repair and recombination proteins [BR:csha03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     EG350_17970 (recJ)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     EG350_17970 (recJ)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      EG350_17970 (recJ)
SSDB
Motif
Pfam: RecJ_OB DHH DHHA1 DSPc Paf1
Other DBs
NCBI-ProteinID: AZA58953
UniProt: A0A3G6QRT8
Position
3994572..3996284
AA seq 570 aa
MSQKWIYKPEPDEEIVDGLSSSLGFGTFESKLLVLRGIDNYQKAREFFKPNLTDIHNPFL
MADMQKAVERIATAIENGEKILVYGDYDVDGTTAVALMYLYLSKIVQKKYLDFYIPDRNS
EGYGISTEGIDFAKENGFSLIIALDCGIKALDMINYAQNLGVDFIICDHHLPGEAIPNAV
AVLDPKRSDCRYPFKELSGCGVGFKLCQGLNTIYKIPEAELFELTDLLAISIAADIVSMT
GENRVFAKMGLKTLRKTRNMGLRLLIPEDKLSHFEISNIVFEIAPKINAAGRISHGKAAV
ELMVSDNLKHAHQIVSDIMDLNDERRELDMNSTLSALNQIIESQQETKYTTIVYHPEWNK
GVIGIVASRLIETYYKPTLVFTDGNNGEMVASARSVSDFDVHEALDMCSEYFLKFGGHHA
AAGLSMEKEKFDAFKEKFERIVSEKIKEHQKEPSITIDSEIQIEDINREFINFHRKLAPF
GPHNMKPILALTNQRVAGYIKTMGKDNNHLKFYIRQESTGRNIECVGFKLGQFADNFRTK
SFDLAFTLEENHWKGNVTHYLNIKDVKFRD
NT seq 1713 nt   +upstreamnt  +downstreamnt
atgagtcaaaaatggatttacaagcccgaacccgatgaagaaattgtggatggattaagt
tcgtctcttggttttggaactttcgaatctaagctcctcgttcttagaggaattgacaat
tatcaaaaggccagagagttttttaaaccaaaccttacagacattcacaatcctttttta
atggcagatatgcagaaagctgtagagcgtattgctactgcgattgagaacggagaaaaa
atactggtatatggggattacgacgtagacggaactaccgccgttgcccttatgtatctc
tatctcagtaaaattgttcagaaaaaatatctagatttttatattcccgacagaaattct
gaagggtacggaatttccacagaaggtattgattttgccaaagaaaacggcttttcatta
attatcgcgttggattgtggaattaaagcgttggatatgatcaattatgcccagaattta
ggtgttgattttatcatctgcgaccaccatttacccggtgaagccattccgaatgctgtt
gctgttcttgatcctaaaagaagcgactgccgttatcctttcaaggaactttccggctgc
ggtgtcgggtttaaactttgccagggcttaaataccatttataaaatccctgaagcagag
ctgtttgaacttacagaccttctggcaatttccattgccgcagatattgtctctatgacc
ggtgaaaacagggtttttgctaaaatgggacttaaaacgcttcggaaaaccagaaatatg
ggattaagactgttaattcctgaagacaaactctctcattttgaaatttccaatattgta
tttgaaattgctccaaagattaatgctgcaggaagaatttcacacggaaaagcagctgtt
gaactgatggtttccgataacctgaaacacgcccaccagattgtaagcgatatcatggat
ctcaacgatgaaagacgtgagcttgatatgaattctaccctttctgctttaaaccaaatt
attgaatctcagcaggagacaaaatataccaccatcgtttatcatccggaatggaataaa
ggggtaattggtattgttgcgtcaagattaattgaaacgtattataagcctaccctggtt
tttactgacggaaacaatggagaaatggttgcttctgcaagatccgtttcagattttgat
gttcatgaagcattggatatgtgttcagaatatttcctgaaattcggaggacatcacgct
gcggcaggactttcgatggaaaaagaaaagtttgatgcttttaaagaaaaattcgagaga
atcgtttcagaaaaaatcaaagaacatcaaaaggagccttccataaccattgattctgaa
attcagattgaagatattaacagggagtttattaattttcaccggaaactggcacctttc
gggcctcacaatatgaaacctatcctggctttaaccaatcagagggttgcaggctatatt
aaaaccatgggaaaagataataatcatctcaagttttatatcaggcaggaatctacggga
agaaatattgaatgcgtaggattcaagctgggacagtttgccgataattttaggacaaag
agctttgatcttgcctttacgcttgaggaaaatcactggaagggtaatgtgacacattac
ctgaatattaaagatgtgaaattcagggattaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (14)   

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