KEGG   Cronobacter malonaticus CMCC45402: P262_01154
Entry
P262_01154        CDS       T02955                                 
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
  KO
K03215  23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
Organism
csi  Cronobacter malonaticus CMCC45402
Brite
KEGG Orthology (KO) [BR:csi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:csi03009]
    P262_01154
Enzymes [BR:csi01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.190  23S rRNA (uracil1939-C5)-methyltransferase
     P262_01154
Ribosome biogenesis [BR:csi03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    P262_01154
SSDB
Motif
Pfam: tRNA_U5-meth_tr Methyltransf_31 TRAM PCMT Methyltransf_25 Cons_hypoth95 Met_10 RrnaAD MTS Methyltransf_23 CMAS Methyltransf_11 MetW Methyltransf_15 FtsJ PRY Ubie_methyltran Methyltransf_4
Other DBs
NCBI-ProteinID: AHB69183
UniProt: V5TVM0
Position
855222..856538
AA seq 438 aa
MRNFLAMAQFYSAKRRVTTREIITVTADGLDAFGQGVARHHGKALFISGLLPGERAEVVL
SEDKKQFARGDVKKRLSQSPERETPRCPHFGVCGGCQQQHASVELQQRAKAQALSRMMKR
EVDEVISGPAWGYRRRARLSLNFPPRKPGLQMGFRKAGSNDLVDVHRCPVLVPRLEALLP
KLRDCLSSLDGVRHLGHVELVDVTSGPLMVLRHLKPLSAADREKLECFSHSEGVALYLAP
QSDTLEHLNGEMPWYESDGLRLTFSPRDFIQVNEAVNQQMVARALEWLDIQPGERLLDLF
CGMGNFTLPLARRAESVVGVEGVAALVEKGDYNARLNALKNVTFFQHNLEEDVTRQPWAQ
QGFDKVLLDPARAGAAGLMQHIVKLKPRRVVYVSCNPATLMRDSEALLAAGYRTERLAML
DMFPHTGHLESMALFERD
NT seq 1317 nt   +upstreamnt  +downstreamnt
gtgagaaatttcctggcgatggcgcaattctactctgcaaagcgacgcgtgacgacgcgt
gaaatcataaccgtgacggctgacggcctcgatgcctttggtcagggcgtggcgcgccat
catggcaaggcgttgttcatctccggtttattgccaggcgagcgcgcggaagtggtgctc
agcgaagataaaaaacagttcgcgcgcggcgacgttaaaaagcggctttcacaaagcccg
gagcgcgagacgccgcggtgtccgcattttggcgtatgcggcggctgccagcaacagcac
gccagcgtggaattacagcagcgcgctaaagcgcaggcgctgagccgcatgatgaagcgc
gaggtggatgaagtgatcagcgggcctgcgtggggctaccgccgccgcgcgcgtctgagc
ttgaatttcccgccgcgcaaaccaggcttacagatgggttttcgcaaggcgggttcgaac
gatctggtggatgtgcatcgctgccctgtgcttgtgccccgtcttgaagcgttgctgccg
aaacttcgcgactgcttaagcagccttgatggcgtgcgtcatcttggccatgtcgagctg
gtggatgtgacgagcggtccgttaatggtcttgcgccatctcaagccgttaagtgccgcc
gatcgcgaaaaactggaatgcttttcgcattccgaaggcgtggcgctgtaccttgcgccc
cagagcgatacccttgagcaccttaatggcgagatgccgtggtatgaatccgacggcctg
cggcttaccttcagcccgcgcgattttattcaggtcaacgaggctgtaaaccagcaaatg
gtggcccgcgcgctggagtggctggatattcagcccggcgagcgcttgctggatctcttc
tgcggcatgggcaactttacgctgccgctggcgcggcgcgcggaaagtgtggtgggcgtg
gagggcgttgcggcgctggtggagaaaggtgactataatgcccgccttaatgcgttgaaa
aacgtcacattctttcagcataacctggaagaagacgtcacccggcaaccgtgggcgcag
caggggttcgacaaagtgctgctcgatcccgcgcgtgcgggcgcggcgggcctgatgcag
catattgtgaaattaaaaccgcgtcgggtggtctatgtctcctgtaaccctgccacgctg
atgcgtgacagtgaggcgctgcttgcagcgggctatcgcaccgaacggctggcgatgctg
gatatgtttccacacaccggccatctggaatcgatggcgttgtttgaaagagattaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (18)   
   Pfam (18)   
All databases (27)   

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