KEGG   Coccomyxa subellipsoidea: COCSUDRAFT_26298
Entry
COCSUDRAFT_26298  CDS       T02914                                 
Name
(RefSeq) signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
csl  Coccomyxa subellipsoidea
Pathway
csl03060  Protein export
Brite
KEGG Orthology (KO) [BR:csl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    COCSUDRAFT_26298
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:csl02044]
    COCSUDRAFT_26298
Enzymes [BR:csl01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     COCSUDRAFT_26298
Secretion system [BR:csl02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   COCSUDRAFT_26298
  Eukaryotic Sec-SRP protein
   COCSUDRAFT_26298
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N CbiA ArsA_ATPase AAA_31 AAA_22 Zeta_toxin ParA cobW NTPase_1 AAA_30 AAA_33 DnaB_C AAA_16 nSTAND3 ATP_bind_1 AAA_24 MeaB TPP_enzyme_M ATPase AAA_18 AAA_17 YqeC APS_kinase KTI12 CBP_BcsQ
Other DBs
NCBI-GeneID: 17036574
NCBI-ProteinID: XP_005643061
JGI: 26298
UniProt: I0YJE8
AA seq 489 aa
MFDNLSQRLEGVWDTVRKDGKLTADNIKTPMREIRRALLEADVSLPVVRQFVKSVEETAL
GTKVLKGVRPDQQLVKVVNDQLVELMGGQQQDLNDPKDGPQVILMAGLQGVGKTTACGKL
ALALQKRNKRVLMVATDVYRPAAIDQLVSLGERINVPVFEMGTDAKPAEIARRGLAKARA
EDFDAIIVDTAGRLQIDANMMSELREVQATVQPSDTLLVVDAMTGQEAAGLVKAFNEAAE
ITGAILTKMDGDSRGGAALSVKAVSGKPIKFVGTGEKLEALEPFYPDRIASRILGMGDVL
TLVEKAEASIKEEDAAEITKRMLSAKFDFNDFLKQYKMVSGMGSMGQIMKMLPGMNQITE
KQLNEAEKQFKMFEALINSMTPEERTNPDLLAKTASRRRRIARGAGRIEVDVTNMIGTFG
GMRAKMQSLSKMMKMGGGAPGMPQLSDQELLEQTIQSAGSSVSRGKVRRKKEGVRRGGRG
GLAELTRLR
NT seq 1470 nt   +upstreamnt  +downstreamnt
atgttcgacaacctcagccagagactggagggagtgtgggacactgtcaggaaggatggc
aagctcacagcggacaacatcaaaacacccatgcgggagatccggcgagcccttctagaa
gcagacgtgagtttgccagtggtgaggcagtttgtgaagagtgtggaggagacagcgctg
gggaccaaggttctaaagggggtgcggccggaccagcagctggtgaaggtagtcaatgat
cagctcgtagagctcatgggcggccagcagcaggacctcaatgaccccaaggacggcccc
caggtcatcctgatggcgggcctgcagggagtgggaaagacgacggcgtgtgggaagctg
gcgttggcgctgcagaagcgcaacaagcgagtcctcatggtggccaccgatgtgtaccgg
ccggccgccatcgaccagctcgtcagcctgggagagcgcatcaatgtgcctgtgtttgag
atgggcacggatgcaaagccggcggagattgcgaggaggggactcgccaaggctcgcgct
gaggactttgacgccatcatcgtggacacagctggacgcctgcagattgacgccaacatg
atgagcgagctgcgggaggtgcaggcgacggtgcagccatcagatacactcctggttgtg
gacgccatgaccggccaggaggctgctggcctcgtcaaagccttcaacgaggccgcagag
atcaccggcgccattctcacaaagatggacggtgacagccgcggaggagcggcgctgagc
gtgaaggcggtgtccggcaagcccatcaagtttgtgggcacaggagaaaaactggaggct
ctggagcccttctaccctgaccgcattgcctcgcgcatcctcggcatgggggatgtgcta
acgctggtggagaaggcagaggcgtccatcaaagaggaggacgctgcagagatcaccaag
cgcatgctcagcgccaaattcgacttcaatgatttcctgaagcagtacaagatggtctcg
ggcatgggcagcatggggcagatcatgaagatgctcccgggcatgaaccagatcacggag
aagcagctgaatgaggcggagaagcagttcaagatgtttgaagcgctcataaacagcatg
actcccgaggagcggaccaacccagacctcctcgccaagacggcgtcgcggcggcggcgg
atcgcgcgcggggccggccggatcgaggttgacgtgactaatatgatcggcacctttggc
ggcatgcgcgccaaaatgcaatccctctccaagatgatgaaaatgggcggcggcgcgccg
gggatgccgcagctgtcagaccaggagctgttggagcagacaatccagtcagcgggcagc
tcagtttccagggggaaggtacgccggaagaaggagggcgtgcggcgggggggccggggg
ggtctggcagagctgacgcgactgagatga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (50)   
   KEGG ORTHOLOGY (1)   
   RefGene (45)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (27)   
   Pfam (27)   
All databases (86)   

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