KEGG   Coccomyxa subellipsoidea: COCSUDRAFT_27377
Entry
COCSUDRAFT_27377  CDS       T02914                                 
Name
(RefSeq) putative chloroplast 1-hydroxy-2-methyl-2-(E)-butenyl-4-diphosphate synthase precursor
  KO
K03526  (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
Organism
csl  Coccomyxa subellipsoidea
Pathway
csl00900  Terpenoid backbone biosynthesis
csl01100  Metabolic pathways
csl01110  Biosynthesis of secondary metabolites
Module
csl_M00096  C5 isoprenoid biosynthesis, non-mevalonate pathway
Brite
KEGG Orthology (KO) [BR:csl00001]
 09100 Metabolism
  09109 Metabolism of terpenoids and polyketides
   00900 Terpenoid backbone biosynthesis
    COCSUDRAFT_27377
Enzymes [BR:csl01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.7  With an iron-sulfur protein as acceptor
    1.17.7.1  (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (ferredoxin)
     COCSUDRAFT_27377
    1.17.7.3  (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (flavodoxin)
     COCSUDRAFT_27377
SSDB
Motif
Pfam: GcpE Sgf11 zf-RING_7
Other DBs
NCBI-GeneID: 17043685
NCBI-ProteinID: XP_005650225
JGI: 27377
UniProt: I0Z4W2
AA seq 748 aa
MVQHHALHSSQGCSTFSERITNKRAACISHTSRGRRRHIPIQGVVAEGPIILPQEKKLAL
PKYCESIYQTIRRPTRTIHIGKVETGSEHPVRLQTMTTTDTRDVAGTVEQVKRCVDSGAE
IVRITVQGKKEAAACMDIREALFKDGYDVPLVADIHFQPQVAMMVAEAFEKIRINPGNFA
DGRKTFEVINYDDPAQFKAEQEHIRETFTPLVEKCKRLGRAMRIGTNHGSLSARILSYYG
DTPRGMVESAFEFADICRDHDYHNFLFSMKASNPLVMVQAYRLLAEEMYAKGWDYPLHLG
VTEAGEGEDGRMKSAIGIGALLMDGLGDTIRVSLTEDPELEIVPCGKLAGFGERACREGF
GVDPFPEAHRDIHTFTRRAGRLPEQREGDPVDFRPLLHRDGSVLSAVTLQELEKPELTYR
KLGAKLVVGMPFKDQATSDTLLLPEVPASSDKDKRRALARLQEVGVHVIAPAAALEADPL
QHAVAAFPLSEAAAAVRAGGVRLPEGAGRFAVSVDGTEPEEDVAALRDSGAVLALLNVAP
GVSRVHASRRFFERLQSHDIDIPVIHQRVFPAGVSRDELVLTSGTEIGALLVDGLGDGVA
IECPSEDLDFLRTMSFGLLQGSRMRNTKTEYVSCPSCGRTLFDLQEVTEQIRTQTGHLPG
VSIAVMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKEVVRRGIPMDGACDQLVELIKEH
GRWKEPDAEEEDIEAIAEERLEKGAHLV
NT seq 2247 nt   +upstreamnt  +downstreamnt
atggtgcaacatcatgccctgcatagctcacagggctgcagcactttttcggagaggatt
acaaataaaagagctgcatgcatatcccacacgagcagaggtcgaaggaggcatattccc
atccagggggttgtagcggaaggtcccattattctgccgcaagagaaaaagcttgctctg
ccaaagtactgtgagagcatctaccagacaatccggcgaccaactcgcacgatccacatt
ggcaaggtggagactgggagcgaacacccagtcaggttgcagaccatgacgaccacagat
acacgcgacgtggcggggacggtggagcaagtcaagcggtgcgtggattctggtgcggag
attgtgcggatcacagtacaggggaagaaggaggcggctgcctgcatggacatccgggag
gccctcttcaaagatgggtatgatgtgccgctggtggcggacatccactttcagcctcag
gtggcgatgatggtggcagaggcctttgagaagatccgcatcaacccggggaacttcgcc
gacgggcgcaagaccttcgaggtcatcaattatgacgaccccgcccaattcaaggcagaa
caggagcacatccgtgagaccttcacgccgctggtcgagaagtgcaagcggctggggcgc
gcgatgcgcatcggcaccaaccatggctccctctcagcgcgcatcctctcctactatggc
gacaccccccgcggcatggtggagagcgcgtttgagtttgcggacatctgccgtgaccac
gattaccacaatttcctcttctccatgaaggcatccaacccgcttgtgatggtgcaagcc
taccggctgctggcagaggagatgtatgccaaggggtgggactaccccctgcacctgggt
gtcactgaggcgggagagggcgaggacgggcgcatgaagagcgccatcggcatcggcgcg
ctgctgatggatggcctgggcgatacgatccgcgtgtcactcacggaagaccccgagctc
gagattgtgccctgcgggaagttggcgggctttggggagcgggcttgccgcgaggggttt
ggagtggacccatttccggaggcgcaccgggacatacacaccttcacgcggcgcgcgggg
cggctgccggagcagcgggaaggggaccccgtcgacttccggcccctcctgcaccgcgac
ggctccgtgctgtctgcggtcaccctgcaggagctggagaagccggaattgacctaccgg
aagctgggcgccaagctggtggtgggcatgcctttcaaggatcaggcaacctccgacacg
ctgctcctccctgaagtgccggcgtcctccgacaaagataagcgccgcgcactcgcccgc
ctgcaggaggtgggcgtgcacgtgatcgcgccggcggcggcgctggaggcggacccgctg
cagcatgcggtcgcggcgttccctctctccgaggcggccgcagccgtgcgcgccggcggc
gtgcgcctgccggagggcgccggccgattcgccgtctccgtggacggcaccgagcccgag
gaagatgtcgccgctcttcgggattccggcgcagtgctggcgctcctcaacgttgcaccg
ggcgtcagccgcgtgcatgcgtcccgccgcttcttcgagcggctgcagagccacgacatt
gacatccccgtcatccaccaacgcgtcttcccagcaggagtgtcacgcgacgagctggtg
ctgacgtctggcactgagatcggcgcgctcctcgtggacggcttgggcgacggtgtggcc
atcgagtgcccatcagaggacttggacttcctccgcaccatgtcattcggccttctgcag
ggttctcggatgcgcaacacaaagaccgagtacgtctcctgccccagctgcggccgcaca
ctcttcgaccttcaggaggtcaccgaacagatccgcacgcagaccggacacctgccgggt
gtctccatcgccgtcatgggctgcattgtgaacgggccaggcgagatggccgacgccgat
tttgggtacgtcggcggggcgccaggaaagatcgatctttacgtgggcaaggaggtggtg
aggagggggatcccaatggacggcgcctgtgaccagcttgttgagctgatcaaggagcac
gggcgctggaaggagccagacgctgaggaggaggatattgaggccatcgcggaggagcgc
ctggagaagggggcacacctcgtctga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (4)   
   KEGG PATHWAY (3)   
   KEGG MODULE (1)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (4)   
   KEGG ENZYME (2)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (104)   
   KEGG ORTHOLOGY (1)   
   RefGene (99)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (128)   

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