KEGG   Coccomyxa subellipsoidea: COCSUDRAFT_28383
Entry
COCSUDRAFT_28383  CDS       T02914                                 
Name
(RefSeq) Sec63-domain-containing protein
  KO
K18663  activating signal cointegrator complex subunit 3 [EC:5.6.2.4]
Organism
csl  Coccomyxa subellipsoidea
Brite
KEGG Orthology (KO) [BR:csl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:csl03400]
    COCSUDRAFT_28383
Enzymes [BR:csl01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     COCSUDRAFT_28383
DNA repair and recombination proteins [BR:csl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   Direct repair
    COCSUDRAFT_28383
SSDB
Motif
Pfam: Sec63 DEAD ResIII Helicase_C AAA_22
Other DBs
NCBI-GeneID: 17042814
NCBI-ProteinID: XP_005649357
JGI: 28383
UniProt: I0Z2E4
AA seq 1797 aa
MEEWAQLAFTGYKKLNRIQSRIYPTAFGSNENLLVCAPTGAGKTNIAMIAVLREIGANMR
QGVIQKQDFKIVYVAPMKALAAEVTATFSKRLSALGIVVRELTGDMQLSKRELTETQMIV
TTPEKWDVITRKGGDVAVAQAVRLLIIDEVHLLNDERGPVIETLIARTQRQVEASQSMIR
IVGLSATLPNYKDVGLFLGVNVDTGLFYFDASYRPVPLEMQFVGVTEKRVLDAKNVMDEI
CYEKVVDSLRKGHQAMVFVHSRKDTGKTARTLITKAQNAGETDVFDCSQEDQYPFTLKEI
KRSRNRHGSYPSQELQDLFPGGIGMHHAGMLRSDRNLMEKAFADGMLKVLCTTATLAWGV
NLPAHTVIIKGTQLYDAQKGQFKNLGMLDVQQIFGRAGRPQYEDTGLGIILTQHAQLAHY
LGMLTHQLPIESQFVSNLEDNLNAEIVLGTVTNVKEACAWLSYTYLFVRMLKNPLSYGIP
WEELAADQRLDGRRKQLITDAARKLEKCKMARFDERSGQLYVTELGRVASHFYIRHKSIV
AFNELLKPHMTESEVRFLAMLAQSSEFENMAVREDELPELDALVRSACPFDVKGGPENKH
GKINILLQAYISRVRMESFSLTADMMYVSQNAPRICRALFEICLRRSWSTAAELALTLCK
AFERRLWPHAHALRQFEHALAPELLMKLEDRGLDLDRLWDMEAADIGALLRHPAAGKSIA
ACLEAFPALQLDAVLQPITRTVLRVQLTVQPTFQWRDASHGNSMQWHIWVEDSENEHVYH
SETWMLTKKMMREPQHRLAFTIPIFEPLPSQYYIRVVSDTWLQAEATLPMSFKGLILPER
HPPHTELLDLDPLPVSALDNPLYEAQYKFSHFNPIQTQAFHTLYHTDESVLLGAPTGSGK
TISAELTMLRVFNAHPGKKIIYIAPLKALVRERIKDWGQGLCKKLGKKLVELTGEYTPDM
RALMGADVIICTPEKWDGISRAWHTRSYVKQVCLLIIDEIHLLGADRGPILEVIVSRMRY
IAATMDQPIRFVGLSTALANAIDLADWLGVGPKGLFNFKPSVRPVPLECHIQGFPGKFYC
PRMATMNKPAYAAIQAHSPIKPVLVFVSSRRQTRLTALDLIGYAAADERPRQYVHCPEEE
LEQALDGNLRHTLQFGIGLHHAGLNETDRTVVENLFVAGKIQVLVATSTLAWGVNTPAHL
VIIKGTEFFDAPTRRYVDFPITDVLQMMGRAGRPQYDRHGVAVIMVHEPKKSFYKKFLYE
PFPVESSLQDQVADHFNAEVVAGTIGSKQDAIDYLTWTFFYRRLLQNPSYYNLESTEMED
VSDFLSDMVETTMATLQDAGCVTIEEDGAIGPLTMGRVASFYYLKYQTMATLHTGLHADM
TVPELLGALCAAAEYDELPVRHNEDKLNMTLSAEVRFPIDARSADDPHTKANLLLQARNL
SYVSTQAHMGRVAVPISDYVGDTKGALDNSVRVLQAITDLAADAGWLGTALSTMHLIQGL
MQARWWDENALLMLPRMEASGVQLLASRKLASLPQLLEQCRRQPAQARAALEQALGSSRA
AEEAMTVCERLPLVEMSWQAPRPSGATGRQRYVLEVAVRAARGPRGAAGKAYAPLFPKVK
EAGWWLVLGDASTQELHAIKRVSFSDRANARLSFTAGAAGSGAAPFSNLHLYLMSDAYMG
LDQVHSLDTPSRQPGQEQGSNGRGEHVPEGRTQQREGHRGDRGRGRGGQRRQQPQQRPSQ
PQTQEVQLQQGQLQAEQQEGQQRQREPRSRNRRGRGSGPGPQNTAGVAGETAGAPVP
NT seq 5394 nt   +upstreamnt  +downstreamnt
atggaggagtgggcccagctggcattcaccggctacaagaagctgaaccgcatccagagc
cgcatctacccgacggcctttggcagcaacgagaacctgctggtgtgcgcgcccacgggg
gccggcaagaccaacatcgcgatgatcgcggtgctgcgcgagatcggcgccaacatgcgg
cagggcgtcatccagaagcaggacttcaagatcgtctatgtggcgcccatgaaagccctg
gccgctgaggtcaccgccactttctccaagcgcctctccgccctcggcatagtggtgcgg
gagctcacgggcgacatgcagctgagcaagcgcgagctgacggagacgcagatgatcgtg
accacgcccgagaagtgggacgtcatcacgcgcaagggcggtgacgtggcggtggcccag
gccgtgcgcctgctcatcatcgacgaggtgcacctgctcaatgacgagcgcggtcccgtc
atcgagaccctcatcgcgcgcacgcagcgccaggtggaggcgagccagagcatgatccgc
attgtaggcctgagcgcaacgctgcccaactacaaggacgtgggtctgtttctgggcgtc
aatgtcgacacaggcctcttctacttcgatgcctcgtatcggcctgttcccctggagatg
cagttcgtgggcgtcactgagaagagggtgctggacgccaaaaacgtcatggacgaaatc
tgctatgagaaggtggtggattcactgcggaaggggcatcaggcgatggtgtttgtgcac
tcgcgcaaggacacgggcaagactgcgcgcacgctgatcaccaaagcgcagaacgctggc
gagacggatgtctttgactgctcccaggaggaccagtacccgttcaccctcaaagaaatc
aagcgctcacgcaacaggcatggctcttatccttctcaggagttgcaagatctattccca
gggggcataggcatgcaccatgccggcatgctgcgctcagaccgcaacctcatggagaaa
gcgtttgctgacggcatgctgaaggtcctgtgcacaactgccacgctggcgtggggtgtc
aacctgccggcgcacaccgtcatcatcaagggcacgcagctgtacgacgcgcagaagggc
caattcaagaatctgggcatgctggatgtgcagcaaatttttgggcgggcggggcggccg
caatatgaggacaccgggctgggcatcatactgacacagcacgcgcagctggcccactac
ctgggcatgctgactcatcagctgcccattgagtcccagtttgtcagcaacctggaggac
aacctcaacgctgagattgtgctgggcacggtgacaaatgtgaaggaggcgtgcgcgtgg
ctgtcgtacacgtacctgtttgtgcgcatgctgaagaacccgctgtcctacggcattccc
tgggaggagctggcagccgaccagcgcctggacggccggcgcaagcagctcatcaccgac
gcagcgcgcaagctggagaagtgcaagatggcacgctttgacgagcggagcgggcagctg
tatgtgacagagctgggccgggtggcgtcgcacttttacatccgccacaagtccatcgtg
gccttcaacgagcttctgaagccccacatgactgagtctgaggtgcgctttctggccatg
ctggcgcagagcagcgagtttgaaaacatggcggtgcgggaggatgagctgccagagctg
gacgctcttgtgcgcagcgcgtgcccctttgatgtcaagggcggcccagagaacaagcac
ggcaagatcaacatcctgcttcaggcgtacatctcccgggtgcgcatggagagcttctcg
ctgactgcggacatgatgtacgtgagccagaatgcgccgcgcatctgccgagcgctgttt
gagatctgcctgcgccgcagctggtccaccgctgccgagctggcactcaccctctgcaag
gcgtttgagcggcggctgtggccgcacgcgcatgcgctgcgccagtttgagcacgcgctg
gcgccggagctgctgatgaagctggaggaccggggcctggacctggaccggctgtgggac
atggaggctgccgacatcggggcgctgctgcgccacccggccgctggcaaatccatcgcc
gcctgcctcgaggcgttccccgcgctccagctggacgccgtgctgcagcccatcaccagg
acggtgctgcgggtgcaactgacggtgcagccgacgtttcagtggcgggacgcgtcgcac
ggcaacagcatgcagtggcacatctgggtggaggacagcgagaacgagcacgtgtaccac
agcgagacctggatgctcaccaagaagatgatgcgcgagccgcagcacagactggccttc
accatccccatctttgagccgctgccctcccagtactacatccgggtggtgtcggatacg
tggctgcaggcagaggcaacattgcccatgtcattcaagggcctaattctgccggagcgc
cacccgccccacaccgagctccttgacctggacccactaccagtctctgcgttggacaac
cctctttacgaggcccagtacaagttctctcacttcaaccccatccagacgcaggcgttc
cacacgctgtaccacacggatgagagcgtgctgctgggtgcacccactgggtcgggcaag
accatcagcgctgagctgaccatgctgcgcgtgttcaacgcccacccgggcaagaagatc
atctacatagcacctctcaaggcgctggtgcgggagcggataaaggactggggccagggg
ctgtgcaagaagctgggcaagaagctggtggagctgactggggagtacacccccgacatg
cgcgcgctgatgggcgctgacgtcatcatctgcacgcccgagaagtgggacggcatcagc
cgcgcctggcacacccgctcctacgtcaagcaagtctgcctgctcatcatcgacgagatc
cacctcctgggcgccgacaggggtcctatactggaggtgatagtgtcccggatgcgctac
attgcggccacaatggaccagccgatccgctttgtggggctctccactgcgctggccaac
gccattgacctggcagactggctcggcgtcggccccaagggtctgttcaacttcaagccg
agcgtgcgccctgtcccgctggaatgccacatccagggcttccccggcaagttctattgc
ccgcgcatggccaccatgaacaagccggcctatgccgccatccaggcgcactcgcccata
aagccggtgctggtgtttgtgagctcgcggcgccagacgcggctgacggcgctggacctc
atcggctacgcggcggccgatgagcggccgcgccaatatgtgcactgccccgaagaggag
ctcgagcaggcgctggatggcaacctgcgccacacgctgcagtttggcattgggctgcac
catgccggcctcaacgagaccgaccgcaccgtagtcgagaatctgttcgttgccggcaag
atccaggttttggtggcaacgagcactctggcctggggtgtcaatacaccagcacacctg
gtcatcatcaagggcacagagttctttgatgctcccaccaggcgctacgttgacttcccc
ataacggacgtgctgcagatgatggggcgagcggggcggccgcagtatgaccggcatggc
gtggccgtaatcatggtgcacgagcccaaaaagtccttctacaagaagttcctctacgag
cccttccctgtcgagtccagcctgcaggaccaggtggcggaccacttcaatgctgaggtg
gtggcgggcacaataggctccaagcaggacgcgatagactacctcacctggaccttcttc
taccggcgcctgctgcagaatccgtcctactacaacctggagagcacagagatggaggac
gtcagcgacttcctgtccgacatggtggaaaccaccatggccaccctgcaggatgctggc
tgcgtgacaatcgaggaggatggcgcgattgggcccctgacgatggggcgagtggcaagc
ttctactacctcaaataccagaccatggccaccctgcacaccggcctgcacgctgacatg
accgtgcccgagttgttgggcgcgctgtgtgcggcggcagagtatgacgagctgccggtg
cggcacaacgaggacaagctcaacatgacgctgtcggccgaagtgagattcccgatcgac
gcccgctccgccgacgacccccacaccaaagccaacctcctgctgcaggcgcgcaattta
tcctatgtgtccacgcaggcgcacatggggcgggtggcggtgccgatcagcgactacgtg
ggggacacgaagggcgcgctggacaacagcgtgcgcgtgctgcaggccatcaccgacctg
gcagccgacgccggatggctgggcaccgccctctccaccatgcacctcatccagggcctc
atgcaggctcgctggtgggacgagaatgcgctgctgatgctgccgcgcatggaggcgagc
ggggtgcagctgctggcttccaggaagctggcgtcgctgccgcagcttctggaacagtgc
cgtcggcagcctgcccaggcccgggctgccctggagcaagccctgggcagctcaagggca
gccgaggaagccatgacggtgtgcgagcggctgcctctggtggagatgtcctggcaggcg
cccaggccgagtggggcgaccggcaggcagcgctatgtgttggaagtggcagtccgagca
gcgaggggtcctcgaggagcggccggaaaggcctatgcccccctcttccccaaggtgaag
gaggcaggatggtggctggtgctgggggatgcgagcacacaagagctgcatgccataaag
cgcgtgtccttctccgacagggccaatgcgcgactcagctttactgcaggcgccgctggc
tccggcgctgcgcccttctccaacctgcacctgtacctgatgtcggacgcctacatgggg
ctggaccaagtgcacagcttggacactcccagcagacagcctggccaggagcagggcagc
aatggcagaggggaacatgtgcctgaggggcgcacacagcagagggagggtcacagaggc
gataggggaaggggacgtggcggccaacggcgccagcagccgcagcagagaccgtcgcag
ccgcagacgcaggaagttcagctgcagcagggtcagctgcaggcagagcagcaggaaggg
cagcagcggcagcgggagcccaggtcccgcaacaggcgcgggcggggatcggggcccggg
ccgcagaacacagcaggggttgctggggaaacagcaggtgctcctgtgccatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (70)   
   KEGG ORTHOLOGY (1)   
   RefGene (65)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (83)   

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