KEGG   Coccomyxa subellipsoidea: COCSUDRAFT_55147
Entry
COCSUDRAFT_55147  CDS       T02914                                 
Name
(RefSeq) peptidase C54
  KO
K08342  cysteine protease ATG4 [EC:3.4.22.-]
Organism
csl  Coccomyxa subellipsoidea
Pathway
csl04136  Autophagy - other
Brite
KEGG Orthology (KO) [BR:csl00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04136 Autophagy - other
    COCSUDRAFT_55147
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:csl01002]
    COCSUDRAFT_55147
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:csl04131]
    COCSUDRAFT_55147
   03029 Mitochondrial biogenesis [BR:csl03029]
    COCSUDRAFT_55147
Peptidases and inhibitors [BR:csl01002]
 Cysteine peptidases
  Family C54: Aut2 peptidase family
   COCSUDRAFT_55147
Membrane trafficking [BR:csl04131]
 Autophagy
  Autophagosome formation proteins
   Atg8 conjugation proteins
    COCSUDRAFT_55147
Mitochondrial biogenesis [BR:csl03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    COCSUDRAFT_55147
SSDB
Motif
Pfam: Peptidase_C54 DUF3682 Peptidase_C78
Other DBs
NCBI-GeneID: 17045138
NCBI-ProteinID: XP_005651667
JGI: 55147
UniProt: I0Z904
AA seq 362 aa
MAQVLGLRRLQEYFQVLNAILSDLMSRIWMTYRRGFPPICGSGITSDVGWGCTLRSGQML
LAQALVYHLVGRQWRRKLEAAYPEEVAQVLQWFGDQACEQRPFSIHNMCTTGQTHGVKAG
DWLGPSGLCHTLADMVNKVQPGGLQCRVVATFGGGAPVLCTSRLATAFEGGADRSGGEVG
SSGSEESGPAGQGLLLLIPLMLGLNGKINPRYCAQLQQLLTWPQSVGIVGGRPSSSLYFI
GLQDQHVLYLDPHEVQEVASEAADLDTYFCSSLRLMPLANIDPSLAIGFYCSSLSDFEDL
CGRLRTLEAEAGCAPLVCMVDEDAGEPSWPAEEVLSDEGIPSDADSPAPPAGGANRDNWE
ML
NT seq 1089 nt   +upstreamnt  +downstreamnt
atggcccaagtgctggggttgcgaaggctgcaggagtatttccaggtgctcaacgcaatc
ctgtcagacctcatgtctcgcatctggatgacataccggagggggttccctccaatatgc
ggctctggcatcaccagcgatgttgggtggggttgcacgctacgaagtggccagatgctg
cttgctcaggcgttggtgtaccacctggtggggaggcagtggcggcggaagctggaggct
gcctacccagaggaagttgcgcaggtgctgcagtggtttggtgaccaggcctgcgagcag
cgccccttctccatccacaacatgtgcaccaccgggcagacccatggggtgaaggcgggg
gactggctggggccctcagggctgtgccacacgctggcagacatggtcaacaaggtgcag
ccgggcggcctccagtgccgagtggtcgccaccttcggcggcggcgcaccggtgctctgc
acatccaggctggcgacggcgtttgaggggggcgcggatcgcagcgggggcgaggtggga
agctcgggcagcgaagaaagtggcccggccgggcagggcctgctgctgctcatccccctc
atgctgggcctgaacggcaagatcaatccgcggtactgtgcccagctgcagcagctgctg
acctggccgcagagcgtgggcatcgttggggggcgtccctcctcctccctctacttcatc
ggcttacaggaccagcatgtgctctacctggacccccacgaggtgcaggaggttgccagc
gaggcggctgacctggacacctacttctgcagctcacttcgcctgatgcccctggccaac
atcgacccctccctcgccatcggcttctactgcagctcactgagcgattttgaggatctg
tgcgggcggctgcggacgctggaggcggaggctggttgcgcgccgctggtgtgtatggtg
gacgaggatgcgggtgagcccagctggccggccgaggaggtcctctcagacgaggggatc
cccagcgatgccgactcccctgcgccccccgccggtggcgccaaccgggacaactgggag
atgctgtga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (40)   
   KEGG ORTHOLOGY (1)   
   RefGene (35)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (52)   

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