KEGG   Coccomyxa subellipsoidea: COCSUDRAFT_55943
Entry
COCSUDRAFT_55943  CDS       T02914                                 
Name
(RefSeq) hypothetical protein
  KO
K22377  E3 ubiquitin-protein ligase listerin [EC:2.3.2.27]
Organism
csl  Coccomyxa subellipsoidea
Brite
KEGG Orthology (KO) [BR:csl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:csl03009]
    COCSUDRAFT_55943
   04121 Ubiquitin system [BR:csl04121]
    COCSUDRAFT_55943
Enzymes [BR:csl01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     COCSUDRAFT_55943
Ribosome biogenesis [BR:csl03009]
 Eukaryotic type
  Pre-60S particles
   Ribosome quality control proteins
    COCSUDRAFT_55943
Ubiquitin system [BR:csl04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    COCSUDRAFT_55943
SSDB
Motif
Pfam: zf-RING_2 FANCL_C zf-UDP zf-RING-like zf-rbx1 zf-ANAPC11 RINGv LRRC37AB_C
Other DBs
NCBI-GeneID: 17040233
NCBI-ProteinID: XP_005646791
JGI: 55943
UniProt: I0YV28
AA seq 1888 aa
MKKADRSKTKASRAARAQELLNSSSQTVVKPAAFGFGGFSGAQQIVPTTSKIPYGSTTSP
AILPQHELDTEVAQRLRQLSKRDPTTKIKALQAMKALVGERPPEEIEGILLAWTKSFQRL
VMDNYRNVRVEAASFMAVLAPMAGRKLAKAMPNLAGPWWLGQSDPDPESARIFKAAFADV
FAGAKGREALVFYRVQVLDYLERNIKSNPVALADVFKEHPEELDERHERVVAGSLKAWDC
LLGALLPAEPSKTPDSAAWEVVVRLKGMLLEQGVLKGLTGLQGSIVIRTSTYSLLATMCK
RASGELKEQIKQLAPQILGALNDKEPAAHASMWDMVLSFLKAYPTAWRYVDVQKAIVPRL
AALLRNAFYGSAEVSAPAVLPLVAQMPRDVLGPDPGFLSQLLGAAWQGWQVAGNLGNARA
ALSDCFAECLAWAMTRSQQLAGDSYEAFCEKLLDSASVIANALNTTSASNSAADTVLKVT
RSVSAPGTSPEILRLFLSQVEKALSKQFAQQPAPPHHFDRGLMILQRIAGVLETTDSESM
SQREAWLAELLYEPLREALLGVFGDQQMPTPAARLLSYLLHPSKDGPKGGTDLTPGAALA
MYLSGPAEGSSAIAMADVLLATMQRSENPAQQFGTIATNLACALAPLSASSNGSLTSLAD
SSREPVNGTRSGQPSRSKQANGHAPGRLSHLLTLVTQLSDSLRKSGGKAKDWRSPRLDAV
AHLLLRQERLAADDHAWKVIAALIRGDHSSALLSESALDSALDILSSYLPADCNVDEETR
NIDLEFSALIALDAVLFSRPILLDDNQSVLRPAAVRALVAVFEIAWVFGSPESTLTHEES
EDERASVADSHVTSLASAARECWSAGTRLAEMGKQLAPQLRASIRRALLQSVLHCIDADA
SLVQRAAAAAQSIITAVCADADDKDAVLDALLRPRNGWPQYVRLDGDDKDKGKAAAESTS
GRPETLSELAFVLGLELGFNAILYDCDGHNRHACMLLQTIDVLQKISLAVRKLQRVWLVT
EMLCFAEQHPGASAVELQAFLAEKGRLLDLPGVAAARSGLLEGTLDRLLEGALGRGTGIC
VSAVYTQVLSGLLQQVISGSERAATAAHCFVRTRIAGPQLTQLPAGILSAVLHSVAKTVR
GLDGREPAVEASGLLAIATRQLKGATSMPPLVAAQVNAPTQVAECLKSLDLVTRCFPVAD
LAVPGKNAASPEERTALIALWQRQLAGERAVRAAAAAEKRSGEPVNPSAAIRQSSEDSET
SPAAALARLANCVVAYCWLELKAEHWAALLMRAKEGVAAAAVVMEDQAEAVVMAGRKAAT
VIASKQEVVGPNLALAILRRLSLLKLPEAAEKLQGAAFGMLTELADDLRFEQLHGVGEGW
VRLLALIVDVDRRSAADCDFPRDWRQKLAEVLSESMRLFLAAGVCAAFIVATGQRATDTA
AMYFDEKALLWTAASRAAESALSDQACLAESIQATDTWAAETGVDAFTAIFALMHASCNH
TVLQSACVRLLTSPTLLQKVALSKDEEDEEDSEAEASPVHADDMYSALVDAGVHDQVAAI
ICGVVCEGPGFAVTWALVLARLLTMAGPARRRLAQAFGDSDELIDALMHDVVAMLPLEDT
PAKRARGPNAHSPALLQQQSAAQRAAQAAQARVNGSSWSLTKELFELGVPGTDEGDKRLA
AALYRGVLFALPASARSWFGRLSHNRSLESSIEAYTAAKESAAIIAAELGGVSGVAASDV
ADTAEFRVRASLAVREAVAILSIEDSSTLEMVVKLPTSWPLRPAEVECRRRVGVAEGRLR
KWLLSITAFLRNQNGSLADAMALWRDNCVREFSGVEECLICYSVVAAADGQLPRLACHTC
SKRFHRACLYKWFRSSGKSLCPHCQSPW
NT seq 5667 nt   +upstreamnt  +downstreamnt
atgaagaaggcagatcggtctaaaacgaaagcctcccgggcagcaagggcccaggaactg
ctcaactcgagctcccagacagtcgtaaagccagccgctttcggtttcggagggttctcg
ggtgcacagcaaattgtgccaactacctcaaaaattccttatggctccactacctctcct
gcaattctgccacagcatgagcttgacacagaggtggcacagcgtctgcgtcagttgtcc
aagcgggatcccaccaccaagatcaaggctcttcaggcgatgaaagctctggttggagag
cgaccaccagaagagatcgaaggcattctgctagcatggaccaagtctttccagcgcctt
gtcatggacaactacaggaatgtgagggtggaggctgcttccttcatggcagtgctggct
cccatggcaggccgcaaattggccaaagccatgcccaacctggcaggcccctggtggctt
ggccaatctgacccagacccagaatctgcgcgcatcttcaaggctgcctttgcggatgtc
tttgctggcgccaaggggcgagaggctcttgtcttctaccgcgtccaggtgctggactac
ttggagcgcaatatcaagtcaaatccagttgctctggcagatgtgttcaaggagcaccca
gaggagctggatgagcgccatgagagggttgtggcaggctctctgaaggcctgggattgc
ctgctgggtgcactgctgcctgccgaaccttctaaaacgccagattcggctgcttgggag
gttgtcgtcaggctgaagggcatgctattggagcaaggcgtgctcaagggcctcacaggc
ctgcaggggtcaattgtcatccgcacctcaacctacagcctactggccaccatgtgcaag
agggcatctggcgagttgaaggagcaaattaagcagcttgcaccccagatcctcggcgct
ctgaacgacaaggagcctgcggcacatgcatctatgtgggacatggtgctttcatttttg
aaggcttatcccaccgcctggcggtatgtggacgtgcagaaggcgattgtgccacggctg
gcagcattgctcaggaatgccttctatggctcggcggaggtgtctgcccctgcggtgctg
ccactggtggcacagatgccgagggatgtgcttggcccagatccaggctttctgtctcag
ctgctgggggcagcatggcagggctggcaggttgctgggaatctggggaatgcacgcgct
gctctctctgactgctttgcagagtgccttgcctgggccatgactcgcagccagcagttg
gccggtgacagctatgaagcgttctgtgagaagctgctagactcggcttctgtcatcgcc
aatgccctgaacacaacttcggcgagcaacagcgcagctgacaccgtcctcaaagtcact
cggagcgtcagcgccccaggcacatcccccgagatcctcaggctgttcttgagccaggtg
gaaaaggcactcagcaaacagtttgcccagcagccagcaccgcctcatcacttcgacagg
ggcctcatgatactgcagcgcatcgctggtgtcctggaaacaactgacagtgagagcatg
tcacagagggaagcgtggctggccgagcttctgtatgagcccctgcgcgaggcactgctt
ggagtctttggagatcagcagatgcccactccagctgcgcgcctgctgtcatacctgctg
catcccagcaaggatggtcccaagggcggaactgatcttactcctggggcggcgcttgcc
atgtatctgtccggccctgcagagggctcaagtgcgattgccatggccgatgtgctgctg
gcgaccatgcagcgctcagagaatcctgcgcaacagtttgggacgattgccaccaacctg
gcttgcgcacttgctcccctgagcgccagcagcaatggcagcttgaccagcttggcagac
agcagcagggagccagtcaatggcacaaggtccggtcagcccagcaggagcaaacaggcg
aacgggcatgctcccggcaggctgtcgcacttgctcaccctggtgacgcagctgtcagac
agcctgaggaaatctggaggcaaggcgaaggattggagaagcccccgcttggatgctgtt
gcgcacttgctcctgcgacaagagaggctggcggctgacgaccatgcatggaaggtgatt
gctgctctgatacggggcgatcactccagcgcactgctcagtgagtctgccctcgacagc
gctctggacatcctgtcctcgtacttgcctgcggactgcaatgtggacgaggagaccagg
aacatagacctagagttctcagcgctcatcgccctggacgctgtgctgttctcccgcccg
atcctcttggatgacaaccagtcagtactgaggccagctgctgtcagggcgctagtggca
gtctttgagatcgcttgggtgtttggaagccccgagtctaccttgactcacgaagagagt
gaggacgagcgcgcttcggtggccgattctcatgtgacctctttggccagtgctgcgagg
gagtgctggagtgctggcaccagactggcagagatgggcaagcagttggcccctcaactc
cgtgccagcatacgccgcgcgctgctgcagtctgtcctgcactgcattgacgcggatgcg
agtctggtacagcgcgcagctgcagcggctcagagcatcatcacagctgtgtgcgcggat
gccgacgacaaggacgctgtgctcgacgccctgctgcggcctcgcaatggctggccccag
tatgtgcgcctggacggtgatgacaaggacaaggggaaggcggctgctgagagcaccagc
ggccgcccagagacgctgtccgagctggcgtttgtgctggggcttgagctgggcttcaat
gctatcctctacgactgcgacggccataacaggcatgcatgcatgctcctacaaacgatt
gacgtattgcagaaaatcagtctggctgtgagaaaactccagagggtctggctcgtcaca
gagatgctgtgctttgcggagcagcacccaggtgcaagcgcggttgagctgcaggctttc
ctggctgagaaggggcggctgctggacctgccaggggtagctgcagcgcgcagtggtctc
ctcgaaggcaccttggataggctcttggagggcgctttggggcgaggtacggggatctgt
gtcagtgctgtgtacacacaagtgctgtccggcctcctgcaacaggtgatcagcggcagt
gagagagcagcgaccgcagcgcattgctttgtgcggacccgcatagctggcccccagctc
acgcagctccctgctggcatcctctccgccgtattgcatagcgttgcaaagactgtgagg
ggcctggatgggcgtgagcctgcagtagaggcatctggcctgttggcaattgcaacacga
cagttgaagggcgctactagcatgccacctctcgtggctgctcaagtcaacgctcctaca
caggtcgccgaatgcctgaaatcgctagaccttgtcacacgctgctttcctgtggcggat
ttggcagtccctggaaagaatgccgctagtcctgaggagaggacagctctcatagccctg
tggcagcgccagctggcaggggagcgggctgtcagggcagcagctgctgcagagaagcgc
agtggcgagcctgtgaaccccagtgctgcgatcaggcagtctagcgaggactctgagacc
agtcctgctgcggcgctggcaaggctggcaaattgcgtggttgcttactgctggcttgag
ctcaaggctgagcactgggccgctctgctgatgcgtgccaaagagggcgtggcagcggcg
gccgttgtcatggaagaccaggctgaagcggtggtaatggcggggcgcaaggcggccaca
gtcatagcctcgaaacaggaagtggtggggcctaatctggctctggcaatcctgcggcgc
ctgagcctgctcaaactgcccgaagccgccgagaagctgcagggtgcggcatttggcatg
ctgacagagctggcggacgaccttcgctttgagcagctgcatggggttggcgaggggtgg
gtgaggttactggcgctgattgtggatgtcgacaggcgctctgctgctgactgcgacttc
ccccgtgactggcgccagaagctggcagaagttctgtcagaatccatgaggctgttcctt
gctgccggcgtctgcgcagcattcatcgtggcgacagggcagcgtgctactgacacggca
gccatgtactttgatgagaaggccttgctctggacagctgcatcccgagccgcagagtcg
gccctgtcagaccaggcttgccttgctgagagcatccaggccacagacacctgggctgct
gaaactggagtcgacgctttcactgctatctttgctttgatgcatgcttcgtgcaatcat
accgttctgcagagtgcttgcgtgaggctcctgaccagcccaacattgctgcagaaagtg
gcgctctcaaaagatgaggaggatgaggaagacagtgaagcggaggcctctccggttcac
gctgacgacatgtacagtgccctggtggatgcgggcgtgcatgatcaggtcgctgcgatc
atatgcggcgtcgtgtgtgagggccccggctttgctgtgacttgggcgctggtgctggcc
cggctgctcaccatggcgggccctgcgcgccgtcggctggcccaagcattcggcgactca
gacgagctgattgatgcgctgatgcatgacgtggtggcgatgctgccgttggaggacact
ccggccaagcgagctcgcggccccaacgcgcactccccggctctgctgcagcagcaatcg
gccgcgcagcgtgccgctcaggctgctcaagctcgcgtgaatggctcctcctggagcctc
accaaggagctctttgagctgggggttccgggcacggatgagggcgacaagcggttggcg
gcggcgctgtatcgcggtgtgctctttgcgctgcctgcttcagccagatcctggtttggc
aggctgtcccacaaccgcagcctggagtcctccattgaggcgtacactgcagcaaaggag
agcgcggccatcattgctgcggagctgggcggcgtgtcgggcgtggcggccagtgacgtg
gcggacaccgcagagttccgcgtgcgcgccagcctggcagtgcgcgaggctgtggcgatc
ctgtccatcgaggacagctccactctggagatggtcgtcaagctgcccacctcctggccc
ctgcgccccgccgaagtcgagtgccgccgcagggtgggtgtggcggaggggcggctgcgc
aagtggctgctgtctataacggcgttcctgcgcaatcagaacggcagcctggcggacgcg
atggcgctgtggcgcgacaactgcgtccgcgagttctccggcgtcgaggagtgcctaatt
tgctactccgtcgtggccgcagccgacgggcagctgccgcgcctggcctgccacacctgc
tccaagcgcttccaccgcgcctgcctctacaagtggttccgctcctccggcaaatccctc
tgcccccactgtcagtccccctggtag

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