KEGG   Coccomyxa subellipsoidea: COCSUDRAFT_66623
Entry
COCSUDRAFT_66623  CDS       T02914                                 
Name
(RefSeq) hypothetical protein
  KO
K03258  translation initiation factor 4B
Organism
csl  Coccomyxa subellipsoidea
Brite
KEGG Orthology (KO) [BR:csl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csl03019]
    COCSUDRAFT_66623
   03012 Translation factors [BR:csl03012]
    COCSUDRAFT_66623
Messenger RNA biogenesis [BR:csl03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     COCSUDRAFT_66623
   mRNA cycle factors
    Stress granule specific factors
     COCSUDRAFT_66623
Translation factors [BR:csl03012]
 Eukaryotic type
  Initiation factors
   eIF-4
    COCSUDRAFT_66623
SSDB
Motif
Pfam: RRM_1
Other DBs
NCBI-GeneID: 17040419
NCBI-ProteinID: XP_005646977
JGI: 66623
UniProt: I0YVL4
AA seq 568 aa
MASKEQSGEAAKPGGKKKGKTLPLTDFLKPNVGRWADEDVDNDTLESLPPLPTAPGEGAG
YQSVGAYSSAPSGPSRPLPDHPPFKVFIGNIPYEATENEMKDIFSPPLEVVDVHIIKHKD
TLKPRGCFVEFATRSDLEKGLMKDGSVVLGRPIRVDVAEDRPDRAQRSGGGFGARSDRDF
DGGRDRRRGYGFGDGGYEDDRRGAGGFEDRRRGGGGGGFADTYGPDRGRPREGGFGRQDD
EGRRGPGGQDRGERGYGGFSGRHEEETGGSRWGHINREPAQLPLRARSPPPPVQEAAEPL
DPTDRPKLTLAPRSKADETGPEQPAAAPVKKANPFGDAKPIDAEAKIREIEEREKKRRMA
EAQKRAAEAEAARAAEVRVKAAAPGRPVNGAGPNRDDDSVSSTSAASAERPHGPGRGGGR
GEGGGRGGRGRGDGHRVGGGGRGPPRTGLPPGLEGHPERGWQGGGRTPRGGYGGRPRSGG
RGDGDSGHHQGPAPGRGPPSRTAAPPAAEPAKDAAGFQTVSAHQRARNRERDADAAKSAG
GPPGLVAKEEPKRAAVSNKFDLLNLDDE
NT seq 1707 nt   +upstreamnt  +downstreamnt
atggcctccaaagagcaatctggagaggctgccaagcccggtggcaagaagaagggcaag
acccttcccctgactgacttcctgaaaccaaatgtgggacgatgggcggatgaggacgtc
gataatgacacacttgagagccttccccctctgccgaccgcacctggagagggcgctggc
taccaatctgttggggcatacagcagcgctccaagcggaccgtctcggccgttgccagac
cacccaccgttcaaggtcttcattggcaacatcccctacgaagccactgagaacgaaatg
aaagatattttctctccccctctcgaggtggtggatgtacacatcatcaagcacaaggac
accctcaagcctcgcggctgcttcgtggaatttgccacacgttctgacttggagaagggc
ctcatgaaggacggctcggttgttcttggcaggcccattcgtgttgatgtggcggaggac
cggcctgatcgcgcacagcgctctggaggtggctttggggcccgttccgaccgcgatttt
gacgggggccgagaccggcggcgcgggtacggctttggcgatggcggctatgaagatgac
cgtaggggcgccggcggttttgaggacaggcgcaggggagggggcggcggcggctttgct
gacacctatggccctgacaggggcaggcccagggagggcggctttgggaggcaagatgat
gagggcagaaggggccctggcggtcaggaccgtggggagcgtggctatggaggcttcagt
ggccgccacgaggaagaaacaggcggcagccggtggggtcacataaacagggagccggcc
cagcttcctctgcgcgccaggtcgcctccgccccctgtgcaggaggccgcggaacctctg
gaccccacagatcgccccaagctcacactggcaccccgctcaaaggcagatgagaccggg
cctgagcaaccagcggcagcacctgtaaagaaggcaaatccttttggagatgctaagcct
atcgacgcagaggctaagatccgtgagattgaggagcgagagaagaagcgcaggatggca
gaggctcagaagagggctgcagaggccgaggcggcgcgggcggcagaggtgcgggtgaag
gcggccgccccgggccgcccagtgaacggggccggccccaaccgcgacgatgacagcgtg
tcgtccaccagtgcggcctcggcagagcggccgcatgggccggggcgcggcggcggccgg
ggggagggtggcgggcgcgggggccgcggccggggcgacggccaccgcgtcggcggcggc
ggccgggggcccccgcgcacggggttgcccccggggctggagggccaccctgagcgcggc
tggcagggcggcggcaggacgccgcgcggcggctacggcggccgcccacgcagcggcggc
aggggcgacggggacagcggccaccaccaagggcctgctccagggaggggtccgccgtcg
cgaacggccgcgccacctgcagccgagccggccaaggatgcggccggtttccagacggtc
agcgcgcaccagcgtgcccgcaacagggagagggatgctgacgcggccaagagcgcaggc
ggccctccaggcctcgtcgccaaggaggagcccaaacgggcagctgtgtctaacaagttc
gacctcctgaatctggacgatgagtga

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Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (86)   
   KEGG ORTHOLOGY (1)   
   RefGene (81)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (94)   

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