KEGG   Cyanobacterium stanieri: Cyast_2269
Entry
Cyast_2269        CDS       T02377                                 
Name
(GenBank) RNA polymerase, sigma subunit, RpsC/SigC
  KO
K03087  RNA polymerase nonessential primary-like sigma factor
Organism
csn  Cyanobacterium stanieri
Brite
KEGG Orthology (KO) [BR:csn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:csn03021]
    Cyast_2269
Transcription machinery [BR:csn03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     Cyast_2269
SSDB
Motif
Pfam: Sigma70_r3 Sigma70_r2 Sigma70_r4 Sigma70_r1_2 Sigma70_r4_2 DUF6127
Other DBs
NCBI-ProteinID: AFZ48218
UniProt: K9YQ52
Position
complement(2509758..2510927)
AA seq 389 aa
MQELPSASSSSSGEFPTVTFSEKTQSANRPPNSRDSVRLYLRDIGRIPLLTKEQEIDLAR
KVRASKKLIDLRDKHGEEEKIAEYIKVFEVYESLSKKLSRFPRFDEWYAELDFTSLQLEQ
VLQSGFQKWAELADLSVDELREILSVGKRAKQQMINANLRLVVSIAKKYQNRGLDLLDLI
QEGTLGLEKAVEKFDYRKGYHFSTYSYWWIRQGMTRAIATQSRSIRIPIHITEKLNLLKK
TQRQLSQALGRTPKAEELAEKMEMTTFELRSFLSQIPRSISLETKVGEDYNTELVELIET
DSATPEENLMLLSMRQDVSTLLDTLSEREAKILRLRYGFEDGKTYSLSDTAQMMHLSRER
VRQIQAKAIQKLRQPNTRQQLHDYLEIIS
NT seq 1170 nt   +upstreamnt  +downstreamnt
atgcaagagttgccctccgcttcttcatcatcatctggggaatttccgacggtgactttt
tcagaaaaaacccaatcggcaaatcgacctccaaattccagagattctgtcaggctgtat
ttacgagatattgggcgaattcctctgctcaccaaagaacaagagattgatttagccaga
aaggtaagggcatcgaaaaaactgatcgatttgcgggataaacacggggaagaggaaaag
attgctgaatatatcaaggtttttgaagtttatgagtctctatcaaaaaaattgtctcgt
tttcctcgtttcgatgaatggtatgcagagcttgatttcacctcacttcaattagaacag
gttttgcagagtggttttcaaaagtgggccgagttggctgatttaagtgtggatgagttg
agagagattttgtcggtgggtaaaagggcaaaacaacagatgattaatgcaaatctgcgt
ttggtggtgtccattgccaagaagtatcaaaaccgtggtttagacttgttggatttgatt
caagagggtactttgggtttggagaaggcggtggaaaaatttgattatcgcaagggttat
catttcagtacctattcctattggtggattcgtcaagggatgacaagggcgatcgcaact
cagagccgttctatccgtatccctatccatattaccgaaaaattaaatttattgaaaaaa
acccaaaggcaactatcccaagccctcggtagaactcccaaagccgaagagttggcggaa
aaaatggaaatgaccacctttgagttacgtagtttcctgagtcaaattcctcgctctatt
tccctagaaaccaaggtgggagaagattataacaccgaattggtggaactaattgaaacg
gattccgcaacccccgaagaaaatttgatgctattgtccatgcgtcaagatgtcagtaca
ttactagataccttgagcgaaagggaggcaaaaatattacgtctgcgttacggtttcgag
gatggaaaaacctactctctcagtgataccgcccagatgatgcacctatcacgggaaagg
gtcagacaaattcaagccaaggcaatccaaaaattgagacaacccaacacccgtcaacaa
ttacatgactatttagaaattatcagttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (13)   

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