KEGG   Clostridium cf. saccharolyticum K10: CLS_01090
Entry
CLS_01090         CDS       T02614                                 
Name
(GenBank) recombination protein RecR
  KO
K06187  recombination protein RecR
Organism
cso  Clostridium cf. saccharolyticum K10
Pathway
cso03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cso00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    CLS_01090
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cso03400]
    CLS_01090
DNA repair and recombination proteins [BR:cso03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     CLS_01090
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      CLS_01090
SSDB
Motif
Pfam: Toprim_4 RecR_HhH RecR_C Toprim RecR_ZnF HHH HHH_5 Prok-RING_4 HHH_8 IMS_HHH YdjO DZR
Other DBs
NCBI-ProteinID: CBK75996
Position
99823..100422
AA seq 199 aa
MDYYSSQITKLIEELSKLPGIGSKSAQRLAFHIINMPAEQVERLSSAITDAKKNVRYCRE
CFTLTDKELCPICESARRDHGIIMVVENTRDLAAYEKTGKYEGVYHVLHGAISPMLGIGP
GDIKLKELMTRLQKEEVREVIIATNSSLEGETTAMYISKLIKPTGIKVTRIASGVPVGGD
LEYIDEVTLLRALEGRTEL
NT seq 600 nt   +upstreamnt  +downstreamnt
atggattactacagcagtcagataacaaaattgattgaggagctgtcaaagctgcccgga
atcggaagcaaatcagctcagcgcctggcctttcacatcataaacatgccggctgagcag
gttgaacgcctttcatcggctatcacggatgccaagaaaaatgtccgttactgccgggag
tgcttcactttgacagacaaggagctttgtcccatctgcgagagcgcaaggcgcgatcac
ggcatcatcatggtagtggagaatacgagggatttggccgcatatgagaagaccggaaag
tatgagggagtttaccacgttctgcacggcgctatatctccgatgctgggaatcggaccc
ggcgatattaagctgaaggagctgatgaccaggctgcagaaggaagaggtgagggaggta
atcattgccaccaactcaagccttgagggagagacgactgccatgtatatcagcaagctg
ataaagcctacggggatcaaggtgactaggattgccagcggtgttcccgtaggcggcgat
ctggagtatatcgacgaggtgactctgctcagggcgctggaaggcagaactgagctgtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (12)   
   Pfam (12)   
All databases (19)   

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