KEGG   Clostridium cf. saccharolyticum K10: CLS_15830
Entry
CLS_15830         CDS       T02614                                 
Name
(GenBank) DNA polymerase III catalytic subunit, DnaE type
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
cso  Clostridium cf. saccharolyticum K10
Pathway
cso03030  DNA replication
cso03430  Mismatch repair
cso03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cso00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CLS_15830
   03430 Mismatch repair
    CLS_15830
   03440 Homologous recombination
    CLS_15830
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cso03032]
    CLS_15830
   03400 DNA repair and recombination proteins [BR:cso03400]
    CLS_15830
Enzymes [BR:cso01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     CLS_15830
DNA replication proteins [BR:cso03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     CLS_15830
DNA repair and recombination proteins [BR:cso03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     CLS_15830
SSDB
Motif
Pfam: DNA_pol3_alpha PHP DNA_pol3_finger HHH_6 tRNA_anti-codon HHH_3 DUF655
Other DBs
NCBI-ProteinID: CBK77165
Position
1515247..1518726
AA seq 1159 aa
MAFTHLHVHTEYSLLDASSKIKELVARAKELGMDSLAITDHGVMYGVIDFYRAAREAGIK
PVLGCEIYVAPGSRFDREIGAGEDKYYHLILLAENNEGYQNLMKIVSTGFVEGFYYKPRV
DFETLERYSRGLICLSACLAGEVQRNLARGMYEEGKKAALRYQSIFGEGNFFLELQDHGI
PLQKTVNQGLLRMSQDTGIPLVATNDCHYIYREDEKSHDILLCIQTGKKVADENRMRYEG
GQYYLKSEEEMKSIFPYALEALENTHKIAERCNVEIEFGVTKIPQFDVPGGKTSWEYLNE
LCEEGFRTRYPDDDGTLRKRLDYELSVIQSMGYVDYFLIVWDFIHFARSHDIMVGPGRGS
AAGSIVSYCLRITDIDPIRYNLLFERFLNPERVSMPDIDIDFCFERRQEVIDYVVQKYGR
DRVVQIVTFGTLAAKGVVRDVGRVLDMPYAKCDAVAKMIPGDLGMTLDKALKTPELREAY
DSDPEIKYLIDMSRRLEGLPRHTSMHAAGVVISRNKVDEYVPLSRAADGSITTQFTMTTL
EELGLLKMDFLGLRTLTVIQNAVRQAEKTHHIKIDLNKIDYNDKAVLESLGTGKNDGVFQ
LESSGMKSFMKELKPENLEDIIAGISLYRPGPMDFIPKYLKGKNDRASITYDCPQLEPIL
SPTYGCIVYQEQVMQIVRDLAGYTLGRSDLVRRAMSKKKAAVMEKERQNFVYGNPEEGVK
GCIANGIDEKTANTIYDEMIDFAKYAFNKSHAAAYAVVSYQTAYLKYYYPVEFMAALMTS
VKDNVSKVSEYILTCRQMGMKIMPPDINEGEGGFSVSNGAIRYGLSALKSIGQTVVDEIV
KERTERGPFVSLADFIDRMSNKEVNKRTIESFIKSGALDSLPGTRKQKFLVSAALLEQKN
KEKKNSMEGQMSLFDFVEEEEKEQFQITFPDVGEYTKEELLAFEKEMLGVYVSGHPLEEY
MDLWKKNVTAVSSDFIVDEEEGHAKVRDGSYVTIGGMITEKTVKTTRQNKMMAFITVEDL
AGTVEVLIFPKDYEKKRDLLIVDEKVFVQGRVSIGDDPVGKVICERIIPFSMVPKEIWLK
YPNKEAYFGAEQELLEMLRLSEGHDQVVIYLEAERAKKVLPANWNVSADETLLRNLSAKL
GEKNIRVVEKTIEKIGKMN
NT seq 3480 nt   +upstreamnt  +downstreamnt
atggcttttacacatcttcatgtgcatacagaatacagcctgctggacgcgtcgtccaag
ataaaggaactggtggcgagggcgaaggagctgggcatggacagtctggcaatcaccgat
cacggcgtcatgtatggagtgattgacttttaccgcgccgccagggaagccggaattaag
cctgttctgggctgcgagatctacgtcgccccgggctccaggttcgaccgggagatcggc
gcgggagaagataagtactatcatctgattctgcttgcagagaacaatgagggatatcag
aacctgatgaaaattgtgtccacgggctttgtggagggattctactacaagcccagggtg
gactttgagactctggaaaggtacagcaggggacttatctgcctttctgcgtgtctggca
ggtgaggtgcagagaaatctggcccgcggcatgtacgaggagggaaaaaaggcggctctc
aggtaccagagcattttcggggagggaaacttcttcctggagcttcaggatcacggaatc
cccctgcagaaaaccgtaaaccagggacttctgcgcatgagtcaggacacgggcatccct
ctcgtggccaccaatgactgccactatatctacagggaggacgagaaatctcatgacatt
ctgctctgcatccagacggggaaaaaggtggcagacgagaaccggatgcgctatgaggga
ggccagtattatctcaagtccgaggaggagatgaagagtatcttcccatatgccctggaa
gcccttgagaatacccataaaattgcagagcgctgcaatgtggagattgaatttggcgtc
acgaagatcccccagttcgacgtgccgggaggaaagacctcctgggaatacttaaatgag
ctgtgcgaggagggattccggacacggtacccggacgacgatggcactctgagaaagagg
cttgactatgagctgtctgtaattcagtccatggggtatgtggactatttcctcattgtc
tgggacttcattcactttgcccgctcccacgatattatggtggggccggggcggggctct
gcggctggaagcattgtgtcctactgcctcaggattacagacattgatcccatccgctac
aacctgctttttgagcgctttctgaacccggagagggtgtctatgccggatattgatata
gacttctgctttgaaaggcgccaggaggtcatcgactatgtggttcagaagtacggcagg
gaccgggtggttcagattgtcaccttcggtaccctggcagccaagggtgtggtcagggac
gtgggaagagtgctcgacatgccctatgcaaagtgcgacgcagtggccaagatgataccg
ggcgatctgggcatgacccttgacaaggctttaaagacaccggagcttcgggaggcctat
gacagcgatccggagatcaagtatctgatcgacatgagccgaaggctcgagggacttccc
agacatacgtccatgcatgcggccggcgtcgtgatcagccggaataaggtagatgagtac
gtgcctctctccagggctgcagacggctccatcaccacccagtttaccatgactaccctg
gaggagctggggcttttaaagatggactttctggggcttcgcaccctcacggtgattcag
aatgccgtgcgccaggcggaaaagacacaccatattaaaatcgacttaaacaagattgac
tataatgacaaggcggtgctggaatctctgggaacggggaagaatgacggtgtgttccag
ctggagagcagcggaatgaagagcttcatgaaggagctgaagccggagaatctggaggac
attatcgccggaatctccctgtaccgcccgggtcctatggattttatccccaagtatctg
aagggaaagaacgacagggcctccatcacctacgactgccctcagctggagcctattctg
agccccacctacggctgtatcgtctatcaggagcaggtaatgcagatcgtgcgggatctg
gccggctacaccctgggacgaagcgacctggtgcgccgtgccatgtcaaagaagaaggcg
gctgttatggaaaaggagcgccagaacttcgtctacggaaatccggaggagggagtgaag
ggctgcatcgcaaacggaattgatgaaaagacggccaacaccatctacgacgagatgatc
gactttgcaaaatacgccttcaacaagtcccacgccgcggcctatgcggtggtttcttac
cagacagcgtatctgaagtattactatccggtggagtttatggcggcccttatgacatcc
gtgaaggacaatgtgtccaaggtttccgagtatattctcacctgccgccagatggggatg
aaaatcatgccccccgacatcaatgagggggagggaggtttctccgtatcaaacggcgct
atccgctacggcctgtcggcgctcaagagcatcgggcagactgtggtggatgagattgta
aaagagagaacagagagagggccctttgtatccctggcagactttattgaccggatgagc
aataaggaggtaaataagaggaccatcgagagctttatcaaatcgggagccctcgacagc
cttcccggcacaagaaaacagaaatttctggtgtcggccgcccttctggagcagaaaaac
aaagaaaagaaaaattccatggaggggcagatgtctctgttcgactttgtggaggaggaa
gagaaggagcagttccagatcacatttccggatgtgggagagtacaccaaggaggagctt
ctggcctttgagaaagagatgctgggcgtgtacgtcagcggtcatcccctggaggagtat
atggacctctggaaaaagaacgtcaccgccgtctcctcggactttatcgtagacgaggag
gagggacatgccaaggtgagagacggctcctatgtgacaatcggaggcatgattacggaa
aaaacggtcaaaactaccagacagaataagatgatggcttttatcaccgtggaggatctg
gcgggaaccgtggaggtgctgatctttccgaaggattatgagaaaaagagggatctcctg
attgtggatgaaaaggtatttgtccagggaagagtttccatcggagatgatccggtggga
aaggtgatttgtgaaagaattatcccattttccatggttcccaaggaaatctggctgaaa
tatccaaacaaggaggcctatttcggggcggagcaggagcttctcgaaatgctccggctc
agcgagggtcatgaccaggttgtgatttatctcgaggcagagcgggcgaaaaaggtgctt
ccggccaactggaatgtgagcgccgacgaaaccctgctcagaaacctttctgcaaaactt
ggtgaaaaaaatatcagagtcgtggaaaaaactattgaaaagatagggaaaatgaattag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (19)   

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