KEGG   Ceratosolen solmsi marchali (fig wasp): 105364436
Entry
105364436         CDS       T06056                                 
Name
(RefSeq) DNA ligase 3
  KO
K10776  DNA ligase 3 [EC:6.5.1.1]
Organism
csol  Ceratosolen solmsi marchali (fig wasp)
Pathway
csol03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:csol00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    105364436
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:csol03400]
    105364436
Enzymes [BR:csol01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     105364436
DNA repair and recombination proteins [BR:csol03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     105364436
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C zf-PARP RNA_ligase LIG3_BRCT mRNA_cap_enzyme Raptor_N DUF3802 BRCT_2
Other DBs
NCBI-GeneID: 105364436
NCBI-ProteinID: XP_011500651
Position
Unknown
AA seq 1043 aa
MSDLNQEEAKQFEIERADNSINKCEKCRYLLLKGDLMIIQYKENSRGEGLVRDTWYHVGC
IFEELSKQPSMTKRIVNPEYDIRKWNLLYDRDKDFVMKKFAEFHPADSFKATKQKAKLSM
TKETYNKKLANNAIDDVGTSSSKITDNYEKKDSYSREFKTLVKKKPTQDNMFSEFQRICD
EISSCSSYLEKTAIVKRMFTKGSEKDGFTGDIVLWCRLLLPGTAKRIYNLQSKALIKLFA
RILNEDEKLMIEDLEEGDVAQTIKTFYQRNSTIKFNMRSELTLQEVDEFLEKLSTLTKEE
EQIYHFKSILRRCTPDDLKMIIRLIKHDLRINAGPKHILEAIHDDAYAAFQVSRDLPFII
RRCLDRSSKASVFSLEKASTSTSLPAPSKLTKSPKSGKIASVALMTPVLPMLAEACKSVD
MAMEKCPRGMLSEVKYDGERVQIHKMGKEFCYFSRSLKPVLAHKVNFLKDCIPKAFPEGD
DLILDAEILLIDTTNGQPLPFGTLGVHKKAKFKNASVCLFVFDIIYYNGKSLMDRPIIER
RELLQKKMMPIPNRIVLSEIQEINDSKILTEMILKTFKLRLEGLVLKSVDSKYEPGKRHW
LKIKKDYLFEGAMADSADLVVVGAWYGTGHKGGIMSIFLMGCYDPDRDIWLTVTKVHTGH
DDATLTELQYSLDMVKISKDPNLLPKWLRANKPMIPDFVARDPKNQPVWEITGAEFTNQG
VHTADGISIRFPRVTRIREDKNWETATNLHELKELFNKSTESIDYSLLLGSHQQKRPADD
DCNLEIKAKKQKQSSCQESSSPGDEKATNSRTININNSNEGLKMEIDEREEHKATVKLKG
RDKNTMVNKSPGKILTKFLNKNKVLEEEEKERSKSSNDSEEENRAKFYSFIGTDYIEYSA
AGSPLNWINDRKPPKYLPKDAKPINEPVESKMKLRCLLSNARVYIANDLDPEKRKAARRT
LKTLGAAILSRAEQNEATHVIHGCASVAATILLEPTDIPKSARHVTESWIYATAANCKVE
NIMDHAVTLSGAYCSCPCPHHKD
NT seq 3132 nt   +upstreamnt  +downstreamnt
atgtctgacttaaatcaagaggaggcgaagcaattcgaaattgagcgagccgataactcc
ataaataaatgtgaaaaatgcagatatttactcttgaaaggtgatctgatgattattcaa
tataaggaaaattctcgtggcgaaggtcttgtccgtgatacctggtatcatgtaggatgc
attttcgaagaactttctaaacagccgtccatgacaaagagaattgtcaatcctgaatat
gatataagaaagtggaatctgctgtacgatcgggacaaagatttcgtaatgaaaaaattt
gccgagtttcaccccgctgattcatttaaagcaaccaaacaaaaagcaaaattgtcaatg
accaaggaaacttataacaaaaagttggcgaataatgcaattgatgatgtcggcacgtct
agcagcaaaataacagataattacgagaagaaagacagttatagtagagagtttaaaact
cttgtgaaaaagaaaccgacgcaggataatatgttttctgaattccaacgaatatgcgac
gaaatttcaagttgtagttcttatttggaaaaaacagctattgtgaaaagaatgtttact
aaaggctctgaaaaagatggctttacgggcgatatcgttctctggtgcagactacttttg
cctggcacagctaagagaatttataatctacaaagtaaagcgctaattaagttatttgca
cgtatacttaacgaagacgaaaagttaatgattgaggatctagaagagggtgacgtggca
caaacgattaaaactttctatcagagaaactcaactataaaattcaacatgaggagtgaa
cttacattacaggaggtagatgaatttttggagaagctgtctacacttaccaaggaagag
gagcagatttatcacttcaaatccatcttaaggagatgcacgcctgatgacttaaaaatg
attattcgactaattaaacatgacctgagaattaacgcgggaccgaaacacatattggaa
gccattcacgatgatgcctacgcggcattccaggtatccagagaccttccatttattatt
cgacgatgcctcgatagatcatcgaaggcgtctgtattttctcttgagaaagcgtctact
tcgacttcgcttcctgccccctcgaagcttacgaaatcaccgaaaagtggcaaaattgcg
agtgttgcgctgatgacaccagtcctaccaatgcttgcagaggcttgcaagtccgtagat
atggccatggaaaaatgtccacgcggtatgttgtctgaagttaaatatgacggtgaaagg
gtgcagattcataaaatgggcaaagaattttgttactttagtcgctctttgaaaccagta
ttggcgcataaagttaattttttaaaagattgtataccaaaagcatttccggaaggtgat
gatttaatacttgacgcggaaatacttttaatagatacgacgaatggccagccacttccc
tttggaacattgggtgttcataagaaggcaaaattcaaaaatgccagcgtttgtttattt
gtttttgatattatttattacaatggtaaatcgctaatggacagaccaataatagaacga
agagagttattacaaaagaaaatgatgcctataccaaatcgaatagtattatcagaaatt
caagaaataaatgattcaaaaatattaactgaaatgattctaaaaacttttaaactccgt
ctcgaaggcttagtgttgaagagcgttgatagtaaatatgaacccgggaagaggcattgg
ttgaagataaagaaggattatttattcgaaggggcaatggctgatagcgcagatctcgtt
gttgtcggtgcttggtacggtactggacataaaggtggaataatgtcaatttttttaatg
ggatgctacgatcctgatcgtgatatatggttaacagttaccaaggtgcatacaggccat
gatgacgcaacattaacggaattgcaatattccttggatatggtaaaaatctccaaagat
cccaatttactgccaaaatggctccgagcaaacaagcctatgatacctgatttcgtcgca
cgcgatcctaagaatcagccagtttgggaaattacaggggccgaatttaccaatcaaggc
gtacatactgccgatggtataagcataagatttcctcgcgtcactcgaattcgcgaggac
aaaaattgggaaacagcaacaaacctacacgaactgaaagagttgttcaataaaagtaca
gaatcaatagattattcgcttctactcggttctcatcagcagaaaaggcccgctgacgat
gactgtaatttagaaataaaagcaaaaaaacaaaagcaatcgagttgtcaagaatcatcg
tcacccggggatgaaaaagcaacaaatagccgcacgataaacataaataattccaacgaa
ggtttaaaaatggaaatagatgaaagagaagaacataaagcaactgtaaaattaaaagga
cgcgataaaaacacaatggttaacaaatctccaggaaaaatactaaccaaatttctcaat
aagaataaagttttagaagaagaggaaaaagaacgttcaaagtcaagtaatgattcagag
gaagaaaatagagcaaaattttattcttttattggcaccgactatatcgagtatagtgca
gcaggtagtccgttaaattggatcaatgatcgaaagccaccaaagtatttaccaaaggat
gcaaaacctataaacgagcctgttgaaagtaaaatgaaattacgatgtttactctcgaac
gcgcgagtttatattgccaatgatttggatcctgaaaagagaaaagctgcccgacgaaca
cttaagacacttggtgcagcgattctctcgagagctgaacaaaacgaagcgactcacgtt
atccatggatgcgctagtgtagccgctacaatcttactagagcccacggatattccaaaa
tcagcaagacatgtaacagaatcctggatatacgccacagccgcaaattgcaaagttgaa
aatattatggatcacgctgtaactttatcaggtgcttattgctcctgtccatgtcctcat
cataaagactga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (10)   
   Pfam (10)   
All databases (27)   

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