KEGG   Ceratosolen solmsi marchali (fig wasp): 105365383
Entry
105365383         CDS       T06056                                 
Name
(RefSeq) 5'-3' exoribonuclease 1
  KO
K12618  5'-3' exoribonuclease 1 [EC:3.1.13.-]
Organism
csol  Ceratosolen solmsi marchali (fig wasp)
Pathway
csol03008  Ribosome biogenesis in eukaryotes
csol03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:csol00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    105365383
  09123 Folding, sorting and degradation
   03018 RNA degradation
    105365383
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csol03019]
    105365383
   03009 Ribosome biogenesis [BR:csol03009]
    105365383
   03016 Transfer RNA biogenesis [BR:csol03016]
    105365383
   03036 Chromosome and associated proteins [BR:csol03036]
    105365383
Messenger RNA biogenesis [BR:csol03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     105365383
  mRNA degradation factors
   5'-3' decay
    5' exonucleases
     105365383
Ribosome biogenesis [BR:csol03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    105365383
Transfer RNA biogenesis [BR:csol03016]
 Eukaryotic type
  tRNA degradation factors
   Rapid tRNA decay (RTD) pathway factors
    105365383
Chromosome and associated proteins [BR:csol03036]
 Eukaryotic type
  Gene silencing
   piRNA pathway
    105365383
SSDB
Motif
Pfam: XRN_N XRN_M XRN1_D2_D3 XRN1_D1 SH3_12
Other DBs
NCBI-GeneID: 105365383
NCBI-ProteinID: XP_011501827
Position
Unknown
AA seq 1897 aa
MGIPKFFRFTSERYPCIVKKLNNEHQIPTFDNLYLDMNGIIHVCSHPNDNDVTYRISEEE
IFKNIFHYIEILFRLVKPEKLFFLALDGVAPRAKVNQQRSRRFKSIKNMELIEAKARERG
EKIPEEKRFDSNCITPGTVFMAKLNEQLKYFVTYKISTDKLWRRCEVILSGSDVPGEGEH
KIMDYLRYIKAKPTYDGKTRHCLYGLDADLIILGLSTHQPYFSILREEVKFNKSAMRSTN
IDELQFCLLHLSLLRDYIEHEFSSVKDKLRFKFDIESIIDDWILMSFLVGNDFIPSLPYF
YIGNNAFIFMYQVYINTLPTLDGYINEGGILNLKRFKKFLQKLGQFDIDYFIQSSSDTKD
LDLKSDKIPCTMLKNDNHSPKLLATKSEDSHGHNEDNENDNANIEDNDNSNKSDKFGNNH
FSLHEFEMYKHDYYMDKMHIENEDIDEKFFQDHSEMYIKTLQWNLHYYYNGCCSWSWYFP
NHYTLFISDIKDFENFKIEFDMAKPFLPFEQLLATFPAASHSLLPAAYHKLIIDKDSPLH
EFYPEDFEVDLNGKKHEWEAIVLIPLIDEKRLLEAMEPCNKNLTAEEKRRNRHKQMSVYT
YTEISQGFHMAPEYFPSIESYAQIELVDRETIIVPQDKLIKGIHKGFDRDVLLPGFPMLQ
HIPHTCLVSKAKLKIFELPSRNENMILTLIPKKAPPIKDLAKKWIGKTVFVSWPFLSEAL
VVEVSNSKLKMLTNQTGKSADESNLITKYLSEKDITRWFSSHKFINETYKMQMGIEIGDI
EIIVWALPILGKRYVYDGKGEMILEKQWSDKPLAFAYQLTLFDLKVHEQYENPVKPITDI
FTPKSVCFMLGHPHYGSMGEVTDAEVDLKSNRIKVAMKVVPEPNLNEIQKLYLNSKNNYM
TVSVAAQRLNISCFLFTKITGTVFAIHNDEENPKWHHIGLNLKFTKMNEKVMGYTQKIND
LWFYSDKTVKLVDEYMRKFPKLFLKFEKHISSPYLLTELLFSENCLESLQEVLTWLKEQQ
KKLNLTLCPCDVEFLEEDAVQALEKVLDESIETQRKATKTVLMQVKPHLLYRPCITIGAV
CPDPNAQHRILDRIICTRENFPVPLGYKGTIISLHLESDNPTCQVIFDKEFVEGLSILGS
SPNRCYKMAITDFINISFGINIENKNVSKTNIVPFSWRQRSQQSDDQHQQQQQQQQQQQK
QSRQQSHRHSYQQQHKQFNDSADSSRTPEHLRKSQATSLKSNNQSPNQSHFYSMFAKDGQ
QNNKCNDKSQSPAKSYSRHDLFTQPDTLIKPSDNNYKCNITPMTTSMVEMAMSPNELLMY
YNSRKKTVVLQKQLNRCTRTSLPSTQNVKSIDTQPTKTPQELWKELNDMQKPVEPAKKQI
ESTAKDETNPISANPDTSPQDPSAFLKAILKISDEKTQSNKASSSTPAPLTNKPLQFTQT
PKATDTPPLVQQLFDHHSRQTEMKGDNNSFYRLQVSSHFQMLGSEPPRYVYSDSQENTVR
VQVLLPDLGLFFGDYCHSYNEAVESAAKKVYEELKLDKRVMTLHPPPRQWFNNTINNIRH
PGAQPVNVNPVLPSAFPQVQQVPQIPPIPPIPPIPQIPQIPQIPPIPQIPQIPQLSHVRA
MQFPMPKWNPTIPQNPLANFTHHVPQQMNHQLHQPKQQARFPPQSPRSNFETKPIKHEPT
IINSTPFVPLQAQKKTRKINKQLNSDEQHKEPQQQQQQQQQQHKPQEKKFQQQQQQKQQE
KRPQQQHKQQEKKSQQQEKKSQQQQQEKKSQQQQHKQQEKKSQQQQNKQQDKKVQNKQQQ
QQPQQQQQQQQQQQKQQPQQKRDSVDNKMDQKFNDVDAKQINQETRINNKFNESDMERSP
AQYVQNAQKGQKFVKQRRSRVAAKFQSDPITNGGEEQ
NT seq 5694 nt   +upstreamnt  +downstreamnt
atggggataccaaagttttttagatttacgagtgaacgatatccttgcatcgttaaaaaa
ttaaacaatgaacatcagatacctacatttgataatttatatttagatatgaatggtatt
atacatgtttgttctcatccaaacgacaatgatgtaacatatcgtatatcagaagaagaa
atatttaaaaatatatttcattatatagaaatactgtttcgtttggtaaagcccgagaaa
ctgtttttcttagcattggatggcgtagcacctcgtgccaaagttaatcaacaacgaagt
cgtcgatttaaaagtataaaaaatatggaactgattgaagccaaggcacgggaacgaggt
gaaaaaattcctgaagaaaaaagatttgattctaattgtattacaccaggaacagtattc
atggcaaaacttaatgaacaattaaagtattttgtcacatataaaatatctacggataag
ctgtggagaaggtgtgaagttattttgagtggatccgatgtacccggtgaaggggaacat
aaaataatggactatttaaggtatataaaggccaagccaacttacgatggaaaaactcgt
cactgtttatatggtttagatgcagatcttataatattgggtttgtctacacatcaacca
tacttttcaatacttcgggaagaagttaaatttaataaaagcgcaatgaggtcgacaaat
atagatgaacttcaattttgtcttttacatttatctttgctaagagattatattgaacat
gaattttcttccgttaaagataaattaaggtttaaattcgatattgaaagcataatagat
gattggattttaatgagttttttagtagggaatgattttattccatcattgccatatttc
tacattggaaataatgcatttatatttatgtaccaagtgtacataaatacattacccact
ttagatggttacattaatgaaggtggaatactgaatctcaaacgctttaaaaagttttta
caaaaacttggacaatttgacatcgactattttattcaaagttcttctgacacaaaggat
ttagatttaaaaagtgataaaataccatgtacaatgctcaaaaatgataatcattcacca
aaattattggcaacaaagtcagaagatagtcatggtcataatgaagataatgaaaatgac
aatgctaatatagaagacaatgataattctaataaatctgacaagtttggtaataatcat
ttttcgcttcatgaattcgaaatgtataagcatgattattatatggataaaatgcatata
gagaacgaagatatagatgaaaaattttttcaagatcatagcgaaatgtacattaaaaca
ctacaatggaatcttcattattattataatggctgctgcagttggtcatggtattttcct
aaccactatacgctatttatatcagatattaaggattttgaaaattttaaaatagaattt
gatatggcaaagccatttttaccgttcgagcaattattggccacctttccagctgctagt
cacagcttattgcccgcagcttatcataaacttataatcgataaagactctccattacat
gaattttatccagaagattttgaagtcgatttaaatggaaagaaacacgagtgggaggca
atagttttaattccactcattgatgaaaaacgtttattagaagcaatggagccatgtaac
aaaaatttgacagcagaagaaaagagaagaaatcgacataaacaaatgagtgtatataca
tacactgagattagtcaaggatttcatatggcacccgaatattttcccagtatcgaaagt
tatgcacaaatcgaattagtcgatagggaaactatcatagtacctcaagataaactaatt
aaaggaatacataagggatttgatagagatgttttattacctggatttcccatgttacaa
cacattccacatacctgtttggtgtcaaaggcaaagttaaagatatttgaactgccttcg
agaaacgaaaatatgattcttactcttataccaaaaaaggccccacctataaaagattta
gctaagaaatggattggtaaaactgtgtttgttagttggccatttttatcagaagcattg
gttgttgaagtatctaacagtaaacttaaaatgctgaccaaccaaacggggaaatcagcg
gatgagagcaatttaataaccaaatatctatccgagaaggatattacaagatggttttct
tcacataaatttataaatgaaacttacaaaatgcaaatgggtatagaaattggagatatt
gagataatcgtttgggcattacccattttgggtaagcgctacgtgtacgacggaaaagga
gaaatgattttagaaaaacaatggagtgacaaaccattggcattcgcatatcaacttact
cttttcgaccttaaagtgcatgaacaatatgaaaatcctgtaaaacccatcaccgatata
tttacgccgaagtccgtatgcttcatgttaggtcatccgcactacggatccatgggagag
gttacagatgcggaagtagatttaaaatcaaatagaatcaaagtggcaatgaaagtagta
cccgagcctaaccttaacgaaattcagaaattgtatttaaactcaaagaataattatatg
acggtttcagtggcagcacagcgtctaaatataagttgttttctttttactaaaataacg
ggaactgtttttgcgatacataatgacgaggaaaatcccaaatggcatcacataggattg
aatttgaagtttacaaagatgaacgagaaagtaatgggatacacacagaaaattaacgat
ttgtggttctacagcgataagaccgttaaattggtagacgagtacatgagaaagtttcct
aaattatttctcaagtttgagaagcatatctcgtcaccttacctgttaaccgaattactt
ttttcagaaaattgtttggagagcctccaggaggtgctaacgtggctaaaggagcagcag
aagaaactcaatttgaccttatgtccttgtgacgtagagtttctcgaggaagatgccgtg
caagcactggagaaggtactcgatgagtcgatcgagactcagcgcaaagctacgaagacg
gtccttatgcaggtgaagccccacctgctctacagaccatgtatcacgatcggggctgtg
tgcccggatcccaatgcccagcatcggatcctcgacaggattatttgcacgagggaaaac
ttcccggtgcctttgggctataaaggcactataataagtctccacctggaatccgacaat
ccaacctgccaggtgatcttcgacaaagaattcgtagagggattatcgattcttggaagc
tcgccgaaccgatgctataagatggcaatcacggattttatcaacataagtttcggtatt
aatattgagaataagaatgtaagcaagacgaacatcgtgccgttttcttggaggcaacga
tcgcagcaatcggatgatcagcatcagcagcagcagcagcagcagcagcagcagcagaaa
caatcgcgccaacaatcacatcgtcactcttaccaacagcagcacaagcaatttaacgac
tcggcggacagttcgcgaacgcccgaacatttgcggaagtctcaagcgacatctctgaaa
tccaacaaccaatcgccaaaccagagccacttttattcgatgtttgcgaaggatggccaa
caaaataacaagtgcaacgataagtcgcaaagcccagcgaaaagttattcgagacacgat
ctgttcacacagccagacacgttgatcaagccgtcggacaataattacaagtgtaatatc
acgccgatgacgacgagtatggttgagatggcgatgtcgcccaacgaacttttgatgtat
tacaatagcaggaagaagacagttgtattgcagaagcagttgaacaggtgcacgaggact
tctttaccatcgacgcaaaatgtaaagagtatagacacgcaaccgacaaagacaccgcag
gaactttggaaagagctcaatgatatgcagaaacctgtagagccggcaaaaaagcaaata
gagtcaactgcaaaagacgagacgaatccaatttcagccaatcccgatacttcccctcaa
gaccctagtgctttcttgaaagcaatattgaaaatttctgacgaaaaaacgcaaagcaac
aaagcatcttcctcgactccggcgccgctgacaaacaaacctttacagtttactcaaacg
ccaaaagcaaccgacactccgcccttggtgcaacagttgttcgatcaccattcgcgccag
acggagatgaagggcgacaataattcgttctatcggctccaggtgagctcgcactttcag
atgctcggctcggaaccgcccaggtacgtctacagcgatagccaagagaataccgtgcgc
gtccaggtcttactgccggacctggggctcttcttcggtgattactgtcactcgtacaac
gaggccgtcgagagcgccgccaaaaaggtctacgaggaactgaaattggacaaaagggtg
atgacgttgcaccctccgccccgacagtggttcaataacacgataaataatattcgccat
ccaggagctcagccggttaacgtgaatcccgtgctaccctcggccttcccccaagtccag
caagtcccccaaattcctccaattcctccaatccctccaatcccccaaatccctcaaatc
cctcaaatcccaccaattcctcaaatccctcaaattcctcaattgtcgcatgtccgggca
atgcagtttcccatgcccaagtggaatccaacgatcccacagaacccactagcaaacttt
acgcatcacgttccccaacaaatgaatcatcagttgcatcagcccaagcagcaggctcgc
tttcctcctcagtccccacgcagtaactttgagactaaacctatcaagcacgagcccacg
ataatcaattcaacgccatttgtaccccttcaggcgcaaaagaagacacgaaaaataaat
aagcaactcaacagtgatgaacaacacaaagaacctcagcagcagcagcagcagcagcag
cagcagcataaaccacaggaaaagaagtttcaacaacagcaacaacaaaagcaacaagaa
aaaaggcctcaacaacagcataaacagcaggaaaaaaaatctcaacagcaggaaaagaag
tctcaacaacagcagcaggagaaaaagtctcaacaacagcagcataaacagcaggagaaa
aagtctcaacaacagcagaataaacagcaggataaaaaggtacaaaataagcaacagcag
caacagccacaacagcagcagcagcagcagcagcagcaacaaaaacagcagccacaacaa
aagagggattcggttgataataaaatggaccagaaattcaacgatgtcgatgccaagcaa
ataaaccaagagaccaggatcaataataagttcaatgaatcggacatggagagaagtcca
gcacagtacgtgcaaaatgcacagaagggtcagaagttcgtcaagcaaagacgatctcga
gttgctgctaaatttcaatccgacccaatcaccaatgggggagaggaacaatga

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (18)   

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