KEGG   Corynebacterium simulans: WM42_0388
Entry
WM42_0388         CDS       T04316                                 
Name
(GenBank) RNA pseudouridylate synthase family protein
  KO
K06177  tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
Organism
csp  Corynebacterium simulans
Brite
KEGG Orthology (KO) [BR:csp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:csp03009]
    WM42_0388
   03016 Transfer RNA biogenesis [BR:csp03016]
    WM42_0388
Enzymes [BR:csp01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.28  tRNA pseudouridine32 synthase
     WM42_0388
    5.4.99.29  23S rRNA pseudouridine746 synthase
     WM42_0388
Ribosome biogenesis [BR:csp03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    WM42_0388
Transfer RNA biogenesis [BR:csp03016]
 Prokaryotic type
  tRNA modification factors
   Psudouridine synthases
    WM42_0388
SSDB
Motif
Pfam: PseudoU_synth_2
Other DBs
NCBI-ProteinID: AMO88141
UniProt: A0A127NSI7
Position
complement(397464..398291)
AA seq 275 aa
MTYRPPAREGISPRKVVLQAVVPADTEYFAAAAGDSPFSPGQLLPAGMALSRPVPAWYHP
DVPEEKPIPFDYTVLYEDRDLIVVDKPHFLPTTSNGRLVRETLQTRLRVDFGEDDIVPLH
RLDRLTAGVVVCSRNPRTRGRYQRLFAERKVTKTYHARLSACLEYSGTVELSMHKVKGSR
QVSLGGTPTLTQVEAHGYTASLIPHTGHTHQLRVVCNYLGAPIQGDDTYPVDRGLDLYDF
SSPLQLVAHRLEFADPLSGTRREFSTLRQLGGNLI
NT seq 828 nt   +upstreamnt  +downstreamnt
gtgacctatcgcccgccagcccgcgaggggatttctccgcgcaaagtagtcctgcaggca
gtcgtgcccgcggacaccgagtacttcgcggccgcggcgggcgattcgccgttttcaccg
gggcagcttctgcctgcgggaatggcgctttcacgtccggtccctgcctggtatcaccct
gatgtgcccgaagagaagccgattcccttcgattacacggtgctttatgaagaccgcgac
ctcatcgtcgtggacaagccacactttttacccacgaccagcaatgggcgattggtgcgc
gagaccctacagacacgcctgcgcgtggatttcggtgaagatgacattgtgccgctgcac
cgcctcgaccgcctgactgccggggtagtggtgtgctcacgcaaccctcgcacacgcggg
aggtatcagaggctttttgctgagcgcaaagtaaccaagacctaccatgcgcgcctttct
gcctgcctggaatactccggaacggttgagctttccatgcacaaggtcaaaggtagccgc
caagtctcgctcggcggtacgcccacgttgacccaagtggaggcacacggctatacggcc
tcgctcattccgcacacggggcatacccaccagctgcgggtggtctgtaactacttaggc
gctcccatccaaggcgacgacacctacccggtagaccgcggactcgacctctacgacttt
tcctcgcctctccaactcgtggcgcaccgcctagagtttgcagatccgttatccggcaca
cgccgcgaattttccactttgcggcaattgggcggtaacctgatttag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (12)   

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