KEGG   Corynebacterium simulans: WM42_0991
Entry
WM42_0991         CDS       T04316                                 
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase, beta subunit
  KO
K03043  DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
Organism
csp  Corynebacterium simulans
Pathway
csp03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:csp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    WM42_0991 (rpoB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:csp03021]
    WM42_0991 (rpoB)
   03400 DNA repair and recombination proteins [BR:csp03400]
    WM42_0991 (rpoB)
Enzymes [BR:csp01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     WM42_0991 (rpoB)
Transcription machinery [BR:csp03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     WM42_0991 (rpoB)
DNA repair and recombination proteins [BR:csp03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      WM42_0991 (rpoB)
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_7 RNA_pol_Rpb2_3 RNA_pol_Rpb2_2 RNA_pol_Rpb2_45 RNA_pol_Rpb2_1
Other DBs
NCBI-ProteinID: AMO88733
UniProt: A0A127NT72
Position
complement(1005159..1008653)
AA seq 1164 aa
MLEGPILAVSRQTKSVANIPGAPKRYSFAKINEPIAVPGLLDLQLDSFAWLIGSPEWRER
EQAERGPEARVTSGLEDILEELSPIQDYSGNMSLSLSEPRFEPVKNTVDECKEKDINYSA
PLYVTAEFINNDTQEIKSQTVFIGDFPMMTDKGTFIVNGTERVVVSQLVRSPGVYFDQTI
DKSTERPLHSVKVIPSRGAWLEFDVDKRDTVGVRIDRKRRQPVTVLLKALGWSEEQIRER
FGFSELMMSTLESDGVANTDEALLEIYRKQRPGEQPTRELAQSLLDNSFFRAKRYDLAKV
GRYKVNRKLGLGGDHDGLMTLTEEDIAVTLEYLVRLHVGEREMTAPNGETIAIHTDDIDH
FGNRRLRTVGELIQNQVRVGLSRMERVVRERMTTQDAESITPTSLINVRPVSAAIREFFG
TSQLSQFMDHNNSLSGLTHKRRLSALGPGGLSRERAGIEVRDVHASHYGRMCPIETPEGP
NIGLIGSLASYARVNAFGFIETPYRKVVDGKVTDEVEYLTADEEDKYAIAQAEIEKEADG
TIVGTRIEVRLKDGDIGVTDASGVDYVDVSPRQMVSVATAMIPFLEHDDANRALMGANMQ
RQAVPLVRSEAPFVGTGMEQRAAYDAGDLIITPKAGIVENVTADLITIMDDEGQRDTYML
RKFERTNQGTNYNQTPLVELGQRVEAGQVLADGPGTHNGEMSLGRNLLVAFMPWEGHNYE
DAIILNQRIVEDDVLTSIHIEEHEIDARDTKLGAEEITREIPNVSDDVLRDLDERGIIRI
GADVRAGDILVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSMKVPHGENGKVIGVAR
FSREDDDDLAPGVNEMIRVYVAQKRKIQDGDKLAGRHGNKGVVGKILPPEDMPFMADGTP
VDVILNTHGVPRRMNIGQVLEVHLGWLAHAGWKVDVDDPANAELLKTLPEELYDVPAGSL
TATPVFDGASNEEIGRLLASSRPNRDGDVMVDEHGKAQLFDGRSGEPYKYPVSVGYMYML
KLHHLVDEKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWAMQAYGAAYTLQELLTI
KSDDVVGRVKVYEAIVKGDNIPDPGIPESFKVLLKELQSLCLNVEVLSTDGTPMELSGSD
DDDMDSPSLGINLSRDERADADIA
NT seq 3495 nt   +upstreamnt  +downstreamnt
gtgctggaaggacccatcttggcagtctcccgccagaccaagtcagtggccaatatccct
ggagccccgaagcgatactcgttcgcgaaaatcaacgagcctatcgccgtcccgggcctc
ctcgatctacaactcgattccttcgcatggctgatcggctcgccagagtggcgcgagcgc
gagcaggctgagcgcggtcccgaggctcgcgtcaccagcggcctcgaggacatccttgag
gaactgtctccgattcaggactactcgggcaacatgtccttgtccctgtcggagcctcgc
ttcgagccggtgaaaaacaccgtcgacgagtgcaaggaaaaggacatcaactactccgcg
ccgctgtacgtgaccgcagagttcatcaacaacgacacccaggagatcaagtctcagacc
gtcttcatcggcgacttcccgatgatgacggacaagggtacgttcatcgttaacggtacc
gagcgtgtcgtcgtttcccagctcgttcgctccccgggcgtctacttcgatcagaccatc
gataagtccaccgagcgtccgctgcactccgtgaaggtgattccttcccgcggtgcatgg
ctggaattcgacgtcgacaagcgcgataccgtcggcgtccgcatcgaccgtaagcgtcgc
cagccggtaaccgtactgctcaaggcccttggttggtccgaggaacagatccgtgagcgc
ttcggcttctccgagttgatgatgtccaccctcgagtccgatggtgtggcaaacactgac
gaggctttgctggagatctaccgcaagcagcgtccgggcgagcagccgacccgcgagctc
gcgcagtccctgctggataactccttcttccgtgcaaagcgctacgacctcgcaaaggtg
ggccgttacaaggtcaaccgcaagctgggtctgggcggtgaccacgatggtctgatgacc
ctgaccgaggaagacatcgctgtcaccctcgagtatctggtacgcctgcacgtaggtgag
cgtgagatgaccgctccgaacggcgagaccatcgccatccacactgacgacatcgaccac
tttggtaaccgtcgtctgcgtaccgtcggcgagctcatccagaaccaggtccgcgttggc
ctgtcccgtatggagcgcgtcgttcgcgagcgcatgactactcaggatgcggagtccatc
actccgacctcccttatcaacgtgcgtccggtttctgctgctatccgcgagttcttcggt
acctcgcagctgtcccagttcatggaccacaacaactccctgtctggtctgacccacaag
cgccgtctgtctgcgctgggcccaggcggtctgtcccgcgagcgcgccggcattgaggtc
cgagacgtgcacgcttctcactacggccgtatgtgcccgattgagactccggagggcccg
aacattggtctgattggctccctggcctcctacgctcgcgtcaatgctttcggcttcatt
gagaccccataccgcaaggttgttgacggcaaggtcaccgacgaggtcgagtacctcacc
gctgatgaggaagataagtacgcaattgcgcaggcggaaatcgagaaggaagctgacggc
accatcgtcggcacccgtatcgaggtccgcctgaaggacggcgacatcggagttaccgac
gcttccggcgtcgactacgttgacgtttccccgcgccagatggtttccgtggcaaccgcc
atgattccgttcttggagcacgacgacgctaaccgtgcgctgatgggcgctaacatgcag
cgccaggcagtgccgctggtgcgctccgaggcacctttcgttggtaccggtatggagcag
cgcgctgcatacgacgccggcgacctcatcatcaccccgaaggctggcatcgtagaaaac
gtcaccgccgatctcatcaccatcatggatgacgagggtcagcgtgacacctacatgctg
cgcaagttcgagcgcaccaaccagggcaccaactacaaccagaccccgctcgtcgagctg
ggccagcgcgtagaggccggccaggttctggctgacggcccgggtacccacaacggcgag
atgtccttgggccgcaacctgttggttgccttcatgccttgggaaggccacaactacgag
gatgcaatcatcctgaaccagcgcatcgtcgaggacgatgttctgacctccatccatatc
gaggagcacgagatcgatgctcgcgataccaagctgggtgccgaggaaatcacccgcgag
atcccgaacgtctccgacgatgttctgcgcgacctcgacgagcgcggcatcatccgcatc
ggtgcggacgtccgcgcaggtgacatcctcgtcggtaaggtcaccccgaagggtgagacc
gagctgaccccggaggagcgcctgttgcgcgccatcttcggtgagaaggcacgtgaggtt
cgcgatacctcgatgaaggttccacacggtgagaacggcaaggttatcggcgttgcgcgc
ttctcccgcgaggacgacgacgatctggcaccgggcgtcaacgagatgatccgcgtttac
gtcgctcagaagcgcaagatccaggatggcgataagctcgctggccgtcacggcaacaag
ggtgtcgtgggcaagatcctgccgccagaggacatgccattcatggctgacggcacgcct
gtcgacgtcatcttgaacacccacggtgttccgcgtcgtatgaacatcggccaggtcctc
gaggtccacctcggctggcttgcccacgccggctggaaggtcgacgttgatgacccagct
aacgctgagctgctcaagaccctgccggaagagctttacgacgtcccggctggttccctg
accgcaaccccggtcttcgacggtgcttccaacgaggagatcggccgcttgctggcttcc
tcccgcccgaaccgcgacggcgacgtcatggttgacgagcacggtaaggcacagcttttc
gatggccgctctggcgagccgtacaagtacccggtttccgtcggctacatgtacatgctc
aagctgcaccacctggtcgacgaaaagattcacgctcgttccaccggcccttactccatg
attacccagcagccgctgggtggtaaggcgcagttcggtggccagcgcttcggcgagatg
gaggtgtgggcaatgcaggcttatggcgctgcctacaccctgcaggagctgctgaccatc
aagtctgacgacgtcgtcggccgtgtgaaggtctacgaggcaatcgtgaagggcgacaac
atcccggatccaggtatcccggagtccttcaaggtcctcctcaaggagctgcagtcgctg
tgtctgaacgtggaggttctctccaccgacggcacgccgatggagctgtctggctctgac
gatgacgacatggatagcccgtcgctgggtattaacctttcgcgcgacgagcgcgctgac
gccgacatcgcatag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (17)   

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