KEGG   Corynebacterium simulans: WM42_1082
Entry
WM42_1082         CDS       T04316                                 
Name
(GenBank) hypothetical protein
  KO
K14415  tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
Organism
csp  Corynebacterium simulans
Brite
KEGG Orthology (KO) [BR:csp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:csp03016]
    WM42_1082
Enzymes [BR:csp01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.8  3'-phosphate/5'-hydroxy nucleic acid ligase
     WM42_1082
Transfer RNA biogenesis [BR:csp03016]
 Eukaryotic type
  tRNA spricing factors
   tRNA splicing ligase complex
    WM42_1082
 Prokaryotic type
   tRNA splicing ligases
    WM42_1082
SSDB
Motif
Pfam: RtcB DUF5005 DUF1269
Other DBs
NCBI-ProteinID: AMO88820
UniProt: A0A127NTF6
Position
complement(1098106..1099266)
AA seq 386 aa
MRLHNFASIVEDKTVAQAQLVADLPFVYPHVALMPDAHFGKGSSVGTVFGTLRAVIPAAV
GVDIGCGMIAVRTHLTHADIQDFALEDLRTAVEDSIPLSPGNYNGWIMDPRTEARTRELA
QLAQDTGVDLSHSKHWRQQLGSLGGGNHFIELCLDEEDRVWLFLHSGSRGVGNKIAQKHI
KAAQRHCEKHWIQLADKDLAYLVEGTEEFDSYIADLHWAQHFALLNRDEMMDRFLDCVAT
WSGADRENLELERINCHHNYTQRENHYGKNVWLTRKGAIKADEGDRGLIPGSMGTASYVV
EGKGYAPGLKSAPHGAGRVMSRTQAKARFTEEDLAARMEGIVYRPGAEFVDEIPDAYKDI
DRVMADATQLVEVKHTLRQILNVKGT
NT seq 1161 nt   +upstreamnt  +downstreamnt
atgcgcctgcacaacttcgcctccattgttgaagacaagacggtggcgcaggcacaactc
gtcgctgacctgcccttcgtctacccacacgtggcgctcatgcctgatgcccacttcggc
aagggctcctcggtcggcaccgttttcggcacgctgcgtgccgtcatcccggcggccgtc
ggcgtggacatcggctgcggcatgattgccgtgcggacccaccttacgcacgcggatatc
caagacttcgctctcgaggacctgcgcaccgcggtcgaagactccattccactctcgccc
ggaaactacaacggttggatcatggacccgcgcaccgaggcccgcacgcgcgagctcgcg
cagctggcccaggacaccggcgtggaccttagtcattcgaagcactggcgccagcagcta
ggcagtttgggcggcggcaaccacttcatcgagctgtgtctcgacgaagaagatcgcgtc
tggctgttcctgcactccggctcgcgcggcgtgggtaacaagattgcacagaagcacatc
aaagctgcgcagcgccactgcgagaagcactggatccagctcgcggacaaggacctggcc
tacctcgtcgagggcacggaagagttcgactcctacattgcggatctccactgggcacag
cactttgcgctgctcaatcgcgatgagatgatggaccgcttcctcgactgcgtcgccacc
tggtccggcgcggatcgcgagaacctcgagctcgagcgcatcaactgccaccacaactac
acccagcgcgagaaccactacggtaagaacgtgtggctcacgcgcaagggcgccatcaag
gcggatgagggcgaccgcggtctcatccccggctcgatgggcaccgccagctacgtcgtg
gaaggcaagggctacgcgccgggccttaagtctgcgccgcacggcgccggccgcgtcatg
tcgcgcacccaggccaaggcccgcttcaccgaggaggaccttgccgcacgcatggaaggc
atcgtctatcgtcccggcgccgagttcgtcgatgagattccggacgcctacaaggacatc
gaccgcgtgatggccgatgccacccagctcgttgaggtcaagcacaccctgcgccagatc
ctcaacgttaagggcacctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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