KEGG T04992: CSF

Campylobacter sputorum: CSF_0294

Entry

CSF_0294          CDS       T04992

Symbol

uvrA

Name

(GenBank) UvrABC nucleotide excision repair complex, subunit UvrA

K03701

excinuclease ABC subunit A

Organism

cspf Campylobacter sputorum

Pathway

cspf03420

Nucleotide excision repair

Brite

KEGG Orthology (KO) [BR:cspf00001]
09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    CSF_0294 (uvrA)
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cspf03400]
    CSF_0294 (uvrA)
DNA repair and recombination proteins [BR:cspf03400]
Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CSF_0294 (uvrA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      CSF_0294 (uvrA)

SSDB

Motif

Pfam:

UvrA_inter ABC_tran UvrA_DNA-bind AAA_29 SMC_N nSTAND1 RsgA_GTPase nSTAND3 AAA_16 APS_kinase AAA_33 AAA_25 Zn-ribbon_8 DnaJ_CXXCXGXG AAA_21 Viral_helicase1 DUF2688

Other DBs

NCBI-ProteinID:

ASM36210

Position

287029..289851

AA seq 940 aa
MNDIINVIGAKQHNLKNINLKIPKNKLVVFTGLSGSGKSTLAFDTLYAEGQRRYLESLSS
YARQFLDRIAKPDVVKIEGLTPAIAIDQKTTSKNPRSTVGTITEIYDYMRLLYARVGIQH
CHKCGKPISKMSASDIINEILKLPYGAKISIISPIVREKKGTFADIIENMRNKGFVRAII
DGVMVRLDEEIELSKTKKHSISIIIDRVGVSKENSARIADDVEKALHESFGEVEIEIANA
KELDIKNSHIHFSEHMACFDCKISFKPLEPLSFSFNSPKGACESCDGLGIRFSLDLTKII
NENATISGGAIKIMHGFFKSYYAKFLQAFCEQMGIKTNVPYCELSQDEQKLLLYGSVKDI
NFLWKRHKLTRKFEGVVKMAYDILKDHKDLENFMSEKICPDCNGHRLKPESLSVKVAGKG
IGDILDMSIEKCVDFFSDEKNFSYLNEQEKMIAIPILNEINARLYFLKNVGLGYLSLGRD
ARTISGGEAQRIRIASQIGSGLSGVMYVLDEPSIGLHERDTAKLIATLRSLQEKGNSVIV
VEHDKKTIEEADFVVDIGPGAGMHGGNVVFSGDVTSLLKSGTQTAQYLNGEKSIDYYKNR
KQDDFLEIKNVNINNISNLSTKFPLRNLVGITGVSGSGKSSLILQTLLPNALEQLNHAKK
IKKIKGVIINGLEKLDKVIYLDQSPIGRTPRSNPATYTGVMDEIRNLFASTKEAKLRGYK
IGRFSFNVKGGRCEKCGGDGEIKIEMHFLPDITVVCDACNGSRYNAQTLEILYKGKNISD
VLNMSVDEALEFFKAVPKINSILHTLQDVGLGYITLGQNATTLSGGEAQRIKLAKELSRS
DTGNTLYILDEPTTGLHFADIDKLTKVLQHLVDLGNSVFVIEHNMDIIKNCDYLIDMGPE
GGSGGGKVIATGSPKDLAKNYKKTHSYTGEYLSYELKGKK

NT seq 2823 nt +upstreamnt +downstreamnt
atgaatgatattataaatgtaattggcgctaaacaacacaatctaaaaaatataaattta
aaaattcctaaaaataaacttgtagtttttacaggacttagtggaagtggtaaaagcaca
cttgcatttgatacgctatatgctgagggtcaaagaaggtatttagaaagtttaagttca
tatgcaagacaatttttagaccgcattgcaaaaccagatgtggttaaaatagaaggctta
actccggcaatagcaatagatcaaaaaacaacatctaaaaatcctcgctcaaccgttgga
actataactgaaatttatgattatatgcgtttattatatgcaagagttggcattcagcac
tgccataaatgcggcaaaccgatatcaaaaatgagtgcaagtgatatcataaatgaaatt
ttaaaactaccatatggagcaaaaatttccattatctccccgatagttcgcgaaaaaaaa
ggaacttttgcagatattatagaaaatatgagaaacaaaggttttgttagagcgataatt
gatggagttatggttcgcctagatgaagagatagagcttagtaaaactaaaaaacactct
atttcgattatcattgatagagttggagtaagcaaagaaaactcagctaggatagcagac
gatgtagaaaaagcacttcatgagagttttggcgaagttgagattgaaatagcaaacgca
aaagagcttgatataaaaaattcccacattcattttagtgagcatatggcttgctttgat
tgtaaaatttcatttaaaccacttgaaccactatcttttagttttaattcaccaaaagga
gcgtgcgaaagttgtgatggtcttgggataagatttagcctagatttaacaaaaattata
aacgaaaatgcaactatatcgggcggagctataaaaataatgcatggtttttttaaaagc
tattatgctaaatttttgcaagcattttgcgaacaaatgggtataaaaacaaatgttcct
tactgcgaattaagccaagatgagcaaaaacttctactttatggaagcgtcaaagatatc
aactttttatggaaaaggcacaaactaacgcgtaaatttgaaggcgttgtaaagatggca
tatgatattttaaaagatcataaagatttagaaaatttcatgagcgagaaaatttgccct
gattgtaacggacatagactaaagccagaaagcttgagtgtcaaagtagcgggaaaagga
attggcgatatcttggatatgagcatagaaaaatgtgtagatttttttagcgatgaaaaa
aattttagttatctaaatgagcaagaaaaaatgatagctatacctatactaaacgaaatt
aacgcaagactttattttcttaaaaatgttggccttggatatctaagtttagggcgagac
gctagaacaataagcggaggagaagcccaaaggataaggatagcttctcaaataggaagt
ggtttaagtggagtaatgtatgtcttagatgagcctagtatcgggcttcacgaaagagat
acggcaaaactcatagcaactcttagaagtctgcaagaaaaaggaaactcggttatagtt
gtagaacatgataaaaaaacgatagaagaagcggactttgtagttgatataggaccagga
gctggaatgcatggaggaaatgttgtatttagtggagatgtgacatctttactaaaatca
ggcacacaaaccgcacagtatctaaatggcgagaaaagtatagattattataaaaacaga
aaacaagatgacttcttagaaataaaaaatgtaaatataaataatatttcaaatttaagc
accaaatttccacttagaaatttagtaggaattacaggcgttagcggaagcggaaaaagt
tctcttatactacaaactcttcttcctaacgcactagaacaactaaatcacgctaagaaa
ataaaaaaaataaaaggtgttatcataaatggacttgaaaaactagataaagtaatttat
cttgatcaaagcccaattggcagaacccctagaagtaatccagcaacatatacaggcgta
atggatgagataagaaatctctttgcttctacaaaagaagccaaacttcgaggatacaag
ataggtagatttagttttaatgtaaaaggtggaagatgtgaaaaatgtgggggtgatggc
gaaataaaaatagaaatgcactttttaccagatattacggtggtttgtgacgcttgcaat
ggctctagatataatgctcaaacactagaaattttatataaaggtaaaaacatttcagat
gtgctaaatatgagcgttgatgaagcgttggagttttttaaggctgtgccaaaaataaac
tctatattgcacactttacaagatgttggacttggatatataactcttgggcaaaatgca
acaacattaagtggtggagaagcccaaaggataaaattagcaaaagaattaagtagaagc
gatacgggaaatactctttatatattagacgaaccaacaactggacttcattttgccgat
attgacaaacttacaaaagttttacagcatttagttgatcttggaaattcggtttttgta
atagaacacaatatggatatcataaaaaattgcgattatctcatagatatggggccagaa
ggcggaagtggtggcggaaaagtaatagcaactggctctccaaaagacttagctaaaaac
tacaaaaagacccattcttatacaggagagtatctaagttacgagttaaagggcaaaaaa
tga

All links

Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (17)   
   Pfam (17)   
All databases (24)   

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